Leveraging the histidine kinase-phosphatase duality to sculpt two-component signaling
Author
Abstract
Suggested Citation
DOI: 10.1038/s41467-024-49251-8
Download full text from publisher
References listed on IDEAS
- Oskar Berntsson & Ralph P. Diensthuber & Matthijs R. Panman & Alexander Björling & Emil Gustavsson & Maria Hoernke & Ashley J. Hughes & Léocadie Henry & Stephan Niebling & Heikki Takala & Janne A. Iha, 2017. "Sequential conformational transitions and α-helical supercoiling regulate a sensor histidine kinase," Nature Communications, Nature, vol. 8(1), pages 1-8, December.
- Weixiao Yuan Wahlgren & Elin Claesson & Iida Tuure & Sergio Trillo-Muyo & Szabolcs Bódizs & Janne A. Ihalainen & Heikki Takala & Sebastian Westenhoff, 2022. "Structural mechanism of signal transduction in a phytochrome histidine kinase," Nature Communications, Nature, vol. 13(1), pages 1-8, December.
- Michael B. Elowitz & Stanislas Leibler, 2000. "A synthetic oscillatory network of transcriptional regulators," Nature, Nature, vol. 403(6767), pages 335-338, January.
- Giacomo Salvadori & Veronica Macaluso & Giulia Pellicci & Lorenzo Cupellini & Giovanni Granucci & Benedetta Mennucci, 2022. "Protein control of photochemistry and transient intermediates in phytochromes," Nature Communications, Nature, vol. 13(1), pages 1-10, December.
- Andrii A. Kaberniuk & Mikhail Baloban & Mikhail V. Monakhov & Daria M. Shcherbakova & Vladislav V. Verkhusha, 2021. "Single-component near-infrared optogenetic systems for gene transcription regulation," Nature Communications, Nature, vol. 12(1), pages 1-12, December.
- Brian P. Landry & Rohan Palanki & Nikola Dyulgyarov & Lucas A. Hartsough & Jeffrey J. Tabor, 2018. "Phosphatase activity tunes two-component system sensor detection threshold," Nature Communications, Nature, vol. 9(1), pages 1-10, December.
- Patricia Casino & Laura Miguel-Romero & Alberto Marina, 2014. "Visualizing autophosphorylation in histidine kinases," Nature Communications, Nature, vol. 5(1), pages 1-12, May.
- Estella F. Yee & Ralph P. Diensthuber & Anand T. Vaidya & Peter P. Borbat & Christopher Engelhard & Jack H. Freed & Robert Bittl & Andreas Möglich & Brian R. Crane, 2015. "Signal transduction in light–oxygen–voltage receptors lacking the adduct-forming cysteine residue," Nature Communications, Nature, vol. 6(1), pages 1-10, December.
- Julia Dietler & Renate Gelfert & Jennifer Kaiser & Veniamin Borin & Christian Renzl & Sebastian Pilsl & Américo Tavares Ranzani & Andrés García de Fuentes & Tobias Gleichmann & Ralph P. Diensthuber & , 2022. "Signal transduction in light-oxygen-voltage receptors lacking the active-site glutamine," Nature Communications, Nature, vol. 13(1), pages 1-16, December.
- Patricia Casino & Laura Miguel-Romero & Alberto Marina, 2014. "Correction: Corrigendum: Visualizing autophosphorylation in histidine kinases," Nature Communications, Nature, vol. 5(1), pages 1-1, May.
Most related items
These are the items that most often cite the same works as this one and are cited by the same works as this one.- Julia Dietler & Renate Gelfert & Jennifer Kaiser & Veniamin Borin & Christian Renzl & Sebastian Pilsl & Américo Tavares Ranzani & Andrés García de Fuentes & Tobias Gleichmann & Ralph P. Diensthuber & , 2022. "Signal transduction in light-oxygen-voltage receptors lacking the active-site glutamine," Nature Communications, Nature, vol. 13(1), pages 1-16, December.
- Jin Wang & Bo Huang & Xuefeng Xia & Zhirong Sun, 2006. "Funneled Landscape Leads to Robustness of Cell Networks: Yeast Cell Cycle," PLOS Computational Biology, Public Library of Science, vol. 2(11), pages 1-10, November.
- Avraham E Mayo & Yaakov Setty & Seagull Shavit & Alon Zaslaver & Uri Alon, 2006. "Plasticity of the cis-Regulatory Input Function of a Gene," PLOS Biology, Public Library of Science, vol. 4(4), pages 1-1, March.
- Ankit Gupta & Mustafa Khammash, 2022. "Frequency spectra and the color of cellular noise," Nature Communications, Nature, vol. 13(1), pages 1-18, December.
- Bottani, Samuel & Grammaticos, Basile, 2008. "A simple model of genetic oscillations through regulated degradation," Chaos, Solitons & Fractals, Elsevier, vol. 38(5), pages 1468-1482.
- Margherita Carletti & Malay Banerjee, 2019. "A Backward Technique for Demographic Noise in Biological Ordinary Differential Equation Models," Mathematics, MDPI, vol. 7(12), pages 1-16, December.
- Weiyue Ji & Handuo Shi & Haoqian Zhang & Rui Sun & Jingyi Xi & Dingqiao Wen & Jingchen Feng & Yiwei Chen & Xiao Qin & Yanrong Ma & Wenhan Luo & Linna Deng & Hanchi Lin & Ruofan Yu & Qi Ouyang, 2013. "A Formalized Design Process for Bacterial Consortia That Perform Logic Computing," PLOS ONE, Public Library of Science, vol. 8(2), pages 1-9, February.
- Konstantinos I Papadimitriou & Guy-Bart V Stan & Emmanuel M Drakakis, 2013. "Systematic Computation of Nonlinear Cellular and Molecular Dynamics with Low-Power CytoMimetic Circuits: A Simulation Study," PLOS ONE, Public Library of Science, vol. 8(2), pages 1-24, February.
- Inés P Mariño & Alexey Zaikin & Joaquín Míguez, 2017. "A comparison of Monte Carlo-based Bayesian parameter estimation methods for stochastic models of genetic networks," PLOS ONE, Public Library of Science, vol. 12(8), pages 1-25, August.
- Zhdanov, Vladimir P., 2012. "Periodic perturbation of genetic oscillations," Chaos, Solitons & Fractals, Elsevier, vol. 45(5), pages 577-587.
- Dhiman, Aman & Poria, Swarup, 2018. "Allee effect induced diversity in evolutionary dynamics," Chaos, Solitons & Fractals, Elsevier, vol. 108(C), pages 32-38.
- Javier Santos-Moreno & Eve Tasiudi & Hadiastri Kusumawardhani & Joerg Stelling & Yolanda Schaerli, 2023. "Robustness and innovation in synthetic genotype networks," Nature Communications, Nature, vol. 14(1), pages 1-17, December.
- Chen Jia & Ramon Grima, 2024. "Holimap: an accurate and efficient method for solving stochastic gene network dynamics," Nature Communications, Nature, vol. 15(1), pages 1-14, December.
- T. Ochiai & J. C. Nacher, 2007. "Stochastic analysis of autoregulatory gene expression dynamics," Mathematical and Computer Modelling of Dynamical Systems, Taylor & Francis Journals, vol. 14(4), pages 377-388, November.
- E. Sethe Burgie & Katherine Basore & Michael J. Rau & Brock Summers & Alayna J. Mickles & Vadim Grigura & James A. J. Fitzpatrick & Richard D. Vierstra, 2024. "Signaling by a bacterial phytochrome histidine kinase involves a conformational cascade reorganizing the dimeric photoreceptor," Nature Communications, Nature, vol. 15(1), pages 1-16, December.
- Thomas B. Kepler & Timothy C. Elston, 2001. "Stochasticity in Transcriptional Regulation: Origins, Consequences and Mathematical Representations," Working Papers 01-06-033, Santa Fe Institute.
- Luis Mier-y-Terán-Romero & Mary Silber & Vassily Hatzimanikatis, 2010. "The Origins of Time-Delay in Template Biopolymerization Processes," PLOS Computational Biology, Public Library of Science, vol. 6(4), pages 1-15, April.
- Ashty S. Karim & Dylan M. Brown & Chloé M. Archuleta & Sharisse Grannan & Ludmilla Aristilde & Yogesh Goyal & Josh N. Leonard & Niall M. Mangan & Arthur Prindle & Gabriel J. Rocklin & Keith J. Tyo & L, 2024. "Deconstructing synthetic biology across scales: a conceptual approach for training synthetic biologists," Nature Communications, Nature, vol. 15(1), pages 1-14, December.
- Gabriele Lillacci & Mustafa Khammash, 2010. "Parameter Estimation and Model Selection in Computational Biology," PLOS Computational Biology, Public Library of Science, vol. 6(3), pages 1-17, March.
- Cheng, Guifang & Liu, Hao, 2024. "Asynchronous finite-time extended dissipative sliding mode control for semi-Markovian jump master–slave neural networks," Chaos, Solitons & Fractals, Elsevier, vol. 179(C).
Corrections
All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-49251-8. See general information about how to correct material in RePEc.
If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.
If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .
If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.
For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .
Please note that corrections may take a couple of weeks to filter through the various RePEc services.