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Mechanistic basis of the dynamic response of TWIK1 ionic selectivity to pH

Author

Listed:
  • Franck C. Chatelain

    (Institut de pharmacologie moléculaire et cellulaire
    Ion Channel Science and Therapeutics)

  • Nicolas Gilbert

    (Institut de pharmacologie moléculaire et cellulaire
    Ion Channel Science and Therapeutics)

  • Delphine Bichet

    (Institut de pharmacologie moléculaire et cellulaire
    Ion Channel Science and Therapeutics)

  • Annaïse Jauch

    (Department of Biomedicine)

  • Sylvain Feliciangeli

    (Institut de pharmacologie moléculaire et cellulaire
    Ion Channel Science and Therapeutics)

  • Florian Lesage

    (Institut de pharmacologie moléculaire et cellulaire
    Ion Channel Science and Therapeutics)

  • Olivier Bignucolo

    (Institut de pharmacologie moléculaire et cellulaire
    Swiss Institute of Bioinformatics)

Abstract

Highly selective for K+ at neutral pH, the TWIK1 channel becomes permeable to Na+ upon acidification. Using molecular dynamics simulations, we identify a network of residues involved in this unique property. Between the open and closed states previously observed by electron microscopy, molecular dynamics simulations show that the channel undergoes conformational changes between pH 7.5–6 involving residues His122, Glu235, Lys246 and Phe109. A complex network of interactions surrounding the selectivity filter at high pH transforms into a simple set of stronger interactions at low pH. In particular, His122 protonated by acidification moves away from Lys246 and engages in a salt bridge with Glu235. In addition, stacking interactions between Phe109 and His122, which stabilize the selectivity filter in its K+-selective state at high pH, disappear upon acidification. This leads to dissociation of the Phe109 aromatic side chain from this network, resulting in the Na+-permeable conformation of the channel.

Suggested Citation

  • Franck C. Chatelain & Nicolas Gilbert & Delphine Bichet & Annaïse Jauch & Sylvain Feliciangeli & Florian Lesage & Olivier Bignucolo, 2024. "Mechanistic basis of the dynamic response of TWIK1 ionic selectivity to pH," Nature Communications, Nature, vol. 15(1), pages 1-12, December.
  • Handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-48067-w
    DOI: 10.1038/s41467-024-48067-w
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    References listed on IDEAS

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    1. Baobin Li & Robert A. Rietmeijer & Stephen G. Brohawn, 2020. "Structural basis for pH gating of the two-pore domain K+ channel TASK2," Nature, Nature, vol. 586(7829), pages 457-462, October.
    2. Toby S. Turney & Vivian Li & Stephen G. Brohawn, 2022. "Structural Basis for pH-gating of the K+ channel TWIK1 at the selectivity filter," Nature Communications, Nature, vol. 13(1), pages 1-9, December.
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