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Structural and dynamic insights into the activation of the μ-opioid receptor by an allosteric modulator

Author

Listed:
  • Shun Kaneko

    (Center for Biosystems Dynamics Research (BDR)
    The University of Tokyo)

  • Shunsuke Imai

    (Center for Biosystems Dynamics Research (BDR))

  • Tomomi Uchikubo-Kamo

    (Center for Biosystems Dynamics Research (BDR))

  • Tamao Hisano

    (Center for Biosystems Dynamics Research (BDR))

  • Nobuaki Asao

    (Center for Biosystems Dynamics Research (BDR)
    The University of Tokyo)

  • Mikako Shirouzu

    (Center for Biosystems Dynamics Research (BDR))

  • Ichio Shimada

    (Center for Biosystems Dynamics Research (BDR)
    Hiroshima University)

Abstract

G-protein-coupled receptors (GPCRs) play pivotal roles in various physiological processes. These receptors are activated to different extents by diverse orthosteric ligands and allosteric modulators. However, the mechanisms underlying these variations in signaling activity by allosteric modulators remain largely elusive. Here, we determine the three-dimensional structure of the μ-opioid receptor (MOR), a class A GPCR, in complex with the Gi protein and an allosteric modulator, BMS-986122, using cryogenic electron microscopy. Our results reveal that BMS-986122 binding induces changes in the map densities corresponding to R1673.50 and Y2545.58, key residues in the structural motifs conserved among class A GPCRs. Nuclear magnetic resonance analyses of MOR in the absence of the Gi protein reveal that BMS-986122 binding enhances the formation of the interaction between R1673.50 and Y2545.58, thus stabilizing the fully-activated conformation, where the intracellular half of TM6 is outward-shifted to allow for interaction with the Gi protein. These findings illuminate that allosteric modulators like BMS-986122 can potentiate receptor activation through alterations in the conformational dynamics in the core region of GPCRs. Together, our results demonstrate the regulatory mechanisms of GPCRs, providing insights into the rational development of therapeutics targeting GPCRs.

Suggested Citation

  • Shun Kaneko & Shunsuke Imai & Tomomi Uchikubo-Kamo & Tamao Hisano & Nobuaki Asao & Mikako Shirouzu & Ichio Shimada, 2024. "Structural and dynamic insights into the activation of the μ-opioid receptor by an allosteric modulator," Nature Communications, Nature, vol. 15(1), pages 1-12, December.
  • Handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-47792-6
    DOI: 10.1038/s41467-024-47792-6
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