IDEAS home Printed from https://ideas.repec.org/a/nat/natcom/v15y2024i1d10.1038_s41467-024-46273-0.html
   My bibliography  Save this article

The proteasome modulates endocytosis specifically in glomerular cells to promote kidney filtration

Author

Listed:
  • Wiebke Sachs

    (University Medical Center Hamburg-Eppendorf
    Hamburg Center of Kidney Health)

  • Lukas Blume

    (University Medical Center Hamburg-Eppendorf
    Hamburg Center of Kidney Health)

  • Desiree Loreth

    (University Medical Center Hamburg-Eppendorf
    Hamburg Center of Kidney Health)

  • Lisa Schebsdat

    (University Medical Center Hamburg-Eppendorf
    Hamburg Center of Kidney Health)

  • Favian Hatje

    (University Medical Center Hamburg-Eppendorf
    Hamburg Center of Kidney Health)

  • Sybille Koehler

    (Hamburg Center of Kidney Health
    University Medical Center Hamburg-Eppendorf)

  • Uta Wedekind

    (University Medical Center Hamburg-Eppendorf
    Hamburg Center of Kidney Health)

  • Marlies Sachs

    (University Medical Center Hamburg-Eppendorf
    Hamburg Center of Kidney Health)

  • Stephanie Zieliniski

    (University Medical Center Hamburg-Eppendorf
    Hamburg Center of Kidney Health)

  • Johannes Brand

    (University Medical Center Hamburg-Eppendorf
    Hamburg Center of Kidney Health)

  • Christian Conze

    (Leibniz Institute of Virology)

  • Bogdan I. Florea

    (Leiden University)

  • Frank Heppner

    (Charité)

  • Elke Krüger

    (University Medicine Greifswald)

  • Markus M. Rinschen

    (Hamburg Center of Kidney Health
    University Medical Center Hamburg-Eppendorf)

  • Oliver Kretz

    (Hamburg Center of Kidney Health
    University Medical Center Hamburg-Eppendorf)

  • Roland Thünauer

    (Leibniz Institute of Virology
    University Hamburg
    Advanced Light and Fluorescence Microscopy (ALFM) Facility at the Centre for Structural Systems Biology (CSSB))

  • Catherine Meyer-Schwesinger

    (University Medical Center Hamburg-Eppendorf
    Hamburg Center of Kidney Health)

Abstract

Kidney filtration is ensured by the interaction of podocytes, endothelial and mesangial cells. Immunoglobulin accumulation at the filtration barrier is pathognomonic for glomerular injury. The mechanisms that regulate filter permeability are unknown. Here, we identify a pivotal role for the proteasome in a specific cell type. Combining genetic and inhibitor-based human, pig, mouse, and Drosophila models we demonstrate that the proteasome maintains filtration barrier integrity, with podocytes requiring the constitutive and glomerular endothelial cells the immunoproteasomal activity. Endothelial immunoproteasome deficiency as well as proteasome inhibition disrupt the filtration barrier in mice, resulting in pathologic immunoglobulin deposition. Mechanistically, we observe reduced endocytic activity, which leads to altered membrane recycling and endocytic receptor turnover. This work expands the concept of the (immuno)proteasome as a control protease orchestrating protein degradation and antigen presentation and endocytosis, providing new therapeutic targets to treat disease-associated glomerular protein accumulations.

Suggested Citation

  • Wiebke Sachs & Lukas Blume & Desiree Loreth & Lisa Schebsdat & Favian Hatje & Sybille Koehler & Uta Wedekind & Marlies Sachs & Stephanie Zieliniski & Johannes Brand & Christian Conze & Bogdan I. Flore, 2024. "The proteasome modulates endocytosis specifically in glomerular cells to promote kidney filtration," Nature Communications, Nature, vol. 15(1), pages 1-21, December.
  • Handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-46273-0
    DOI: 10.1038/s41467-024-46273-0
    as

    Download full text from publisher

    File URL: https://www.nature.com/articles/s41467-024-46273-0
    File Function: Abstract
    Download Restriction: no

    File URL: https://libkey.io/10.1038/s41467-024-46273-0?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Avital Eisenberg-Lerner & Ron Benyair & Noa Hizkiahou & Neta Nudel & Roey Maor & Matthias P. Kramer & Merav D. Shmueli & Inbal Zigdon & Marina Cherniavsky Lev & Adi Ulman & Jitka Yehudith Sagiv & Moll, 2020. "Golgi organization is regulated by proteasomal degradation," Nature Communications, Nature, vol. 11(1), pages 1-14, December.
    2. Helen Weavers & Silvia Prieto-Sánchez & Ferdinand Grawe & Amparo Garcia-López & Ruben Artero & Michaela Wilsch-Bräuninger & Mar Ruiz-Gómez & Helen Skaer & Barry Denholm, 2009. "The insect nephrocyte is a podocyte-like cell with a filtration slit diaphragm," Nature, Nature, vol. 457(7227), pages 322-326, January.
    3. Bing He & Ping Chen & Sonia Zambrano & Dina Dabaghie & Yizhou Hu & Katja Möller-Hackbarth & David Unnersjö-Jess & Gül Gizem Korkut & Emmanuelle Charrin & Marie Jeansson & Maria Bintanel-Morcillo & Ann, 2021. "Single-cell RNA sequencing reveals the mesangial identity and species diversity of glomerular cell transcriptomes," Nature Communications, Nature, vol. 12(1), pages 1-19, December.
    4. Yingdi Wang & Masanori Nakayama & Mara E. Pitulescu & Tim S. Schmidt & Magdalena L. Bochenek & Akira Sakakibara & Susanne Adams & Alice Davy & Urban Deutsch & Urs Lüthi & Alcide Barberis & Laura E. Be, 2010. "Ephrin-B2 controls VEGF-induced angiogenesis and lymphangiogenesis," Nature, Nature, vol. 465(7297), pages 483-486, May.
    5. Julia Reichelt & Wiebke Sachs & Sarah Frömbling & Julia Fehlert & Maja Studencka-Turski & Anna Betz & Desiree Loreth & Lukas Blume & Susanne Witt & Sandra Pohl & Johannes Brand & Maire Czesla & Jan Kn, 2023. "Non-functional ubiquitin C-terminal hydrolase L1 drives podocyte injury through impairing proteasomes in autoimmune glomerulonephritis," Nature Communications, Nature, vol. 14(1), pages 1-19, December.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Kevin Boyé & Luiz Henrique Geraldo & Jessica Furtado & Laurence Pibouin-Fragner & Mathilde Poulet & Doyeun Kim & Bryce Nelson & Yunling Xu & Laurent Jacob & Nawal Maissa & Dritan Agalliu & Lena Claess, 2022. "Endothelial Unc5B controls blood-brain barrier integrity," Nature Communications, Nature, vol. 13(1), pages 1-15, December.
    2. Maciej K. Kocylowski & Hande Aypek & Wolfgang Bildl & Martin Helmstädter & Philipp Trachte & Bernhard Dumoulin & Sina Wittösch & Lukas Kühne & Ute Aukschun & Carolin Teetzen & Oliver Kretz & Botond Ga, 2022. "A slit-diaphragm-associated protein network for dynamic control of renal filtration," Nature Communications, Nature, vol. 13(1), pages 1-15, December.
    3. Rida Al-Rifai & Marie Vandestienne & Jean-Rémi Lavillegrand & Tristan Mirault & Julie Cornebise & Johanne Poisson & Ludivine Laurans & Bruno Esposito & Chloé James & Olivier Mansier & Pierre Hirsch & , 2022. "JAK2V617F mutation drives vascular resident macrophages toward a pathogenic phenotype and promotes dissecting aortic aneurysm," Nature Communications, Nature, vol. 13(1), pages 1-17, December.
    4. Yannick Weyer & Sinead I. Schwabl & Xuechen Tang & Astha Purwar & Konstantin Siegmann & Angela Ruepp & Theresia Dunzendorfer-Matt & Michael A. Widerin & Veronika Niedrist & Noa J. M. Mutsters & Maria , 2024. "The Dsc ubiquitin ligase complex identifies transmembrane degrons to degrade orphaned proteins at the Golgi," Nature Communications, Nature, vol. 15(1), pages 1-19, December.
    5. Seong Kyu Han & Michelle T. McNulty & Christopher J. Benway & Pei Wen & Anya Greenberg & Ana C. Onuchic-Whitford & Dongkeun Jang & Jason Flannick & Noël P. Burtt & Parker C. Wilson & Benjamin D. Humph, 2023. "Mapping genomic regulation of kidney disease and traits through high-resolution and interpretable eQTLs," Nature Communications, Nature, vol. 14(1), pages 1-16, December.
    6. Eun-A Kwak & Christopher C. Pan & Aaron Ramonett & Sanjay Kumar & Paola Cruz-Flores & Tasmia Ahmed & Hannah R. Ortiz & Jeffrey J. Lochhead & Nathan A. Ellis & Ghassan Mouneimne & Teodora G. Georgieva , 2022. "βIV-spectrin as a stalk cell-intrinsic regulator of VEGF signaling," Nature Communications, Nature, vol. 13(1), pages 1-14, December.
    7. Shujuan Zhao & Kedous Y. Mekbib & Martijn A. Ent & Garrett Allington & Andrew Prendergast & Jocelyn E. Chau & Hannah Smith & John Shohfi & Jack Ocken & Daniel Duran & Charuta G. Furey & Le Thi Hao & P, 2023. "Mutation of key signaling regulators of cerebrovascular development in vein of Galen malformations," Nature Communications, Nature, vol. 14(1), pages 1-23, December.
    8. Jonas Stewen & Kai Kruse & Anca T. Godoi-Filip & Zenia & Hyun-Woo Jeong & Susanne Adams & Frank Berkenfeld & Martin Stehling & Kristy Red-Horse & Ralf H. Adams & Mara E. Pitulescu, 2024. "Eph-ephrin signaling couples endothelial cell sorting and arterial specification," Nature Communications, Nature, vol. 15(1), pages 1-23, December.
    9. Kuo-Sheng Hsu & James M. Dunleavey & Christopher Szot & Liping Yang & Mary Beth Hilton & Karen Morris & Steven Seaman & Yang Feng & Emily M. Lutz & Robert Koogle & Francesco Tomassoni-Ardori & Saurabh, 2022. "Cancer cell survival depends on collagen uptake into tumor-associated stroma," Nature Communications, Nature, vol. 13(1), pages 1-18, December.
    10. Sandra Schrenk & Lindsay J. Bischoff & Jillian Goines & Yuqi Cai & Shruti Vemaraju & Yoshinobu Odaka & Samantha R. Good & Joseph S. Palumbo & Sara Szabo & Damien Reynaud & Catherine D. Raamsdonk & Ric, 2023. "MEK inhibition reduced vascular tumor growth and coagulopathy in a mouse model with hyperactive GNAQ," Nature Communications, Nature, vol. 14(1), pages 1-20, December.
    11. Hongyu Liu & Ran Duan & Xiaoyu He & Jincu Qi & Tianming Xing & Yahan Wu & Liping Zhou & Lingling Wang & Yujing Shao & Fulei Zhang & Huixing Zhou & Xingdong Gu & Bowen Lin & Yuanyuan Liu & Yan Wang & Y, 2023. "Endothelial deletion of PTBP1 disrupts ventricular chamber development," Nature Communications, Nature, vol. 14(1), pages 1-14, December.
    12. Yi Lei & Qiangyun Liu & Binggui Chen & Fangfang Wu & Yiming Li & Xue Dong & Nina Ma & Ziru Wu & Yanfang Zhu & Lu Wang & Yuxin Fu & Yuming Liu & Yinting Song & Mei Du & Heng Zhang & Jidong Zhu & Timoth, 2024. "Protein O-GlcNAcylation coupled to Hippo signaling drives vascular dysfunction in diabetic retinopathy," Nature Communications, Nature, vol. 15(1), pages 1-23, December.
    13. Hongryeol Park & Jian Song & Hyun-Woo Jeong & Max L. B. Grönloh & Bong Ihn Koh & Esther Bovay & Kee-Pyo Kim & Luisa Klotz & Patricia A. Thistlethwaite & Jaap D. Buul & Lydia Sorokin & Ralf H. Adams, 2024. "Apelin modulates inflammation and leukocyte recruitment in experimental autoimmune encephalomyelitis," Nature Communications, Nature, vol. 15(1), pages 1-20, December.
    14. Christina M. Termini & Amara Pang & Tiancheng Fang & Martina Roos & Vivian Y. Chang & Yurun Zhang & Nicollette J. Setiawan & Lia Signaevskaia & Michelle Li & Mindy M. Kim & Orel Tabibi & Paulina K. Li, 2021. "Neuropilin 1 regulates bone marrow vascular regeneration and hematopoietic reconstitution," Nature Communications, Nature, vol. 12(1), pages 1-17, December.
    15. Mehmet Can Uçar & Edouard Hannezo & Emmi Tiilikainen & Inam Liaqat & Emma Jakobsson & Harri Nurmi & Kari Vaahtomeri, 2023. "Self-organized and directed branching results in optimal coverage in developing dermal lymphatic networks," Nature Communications, Nature, vol. 14(1), pages 1-13, December.
    16. Fuchun Yang & Shiva Kalantari & Banzhan Ruan & Shaogang Sun & Zhaoqun Bian & Jun-Lin Guan, 2023. "Autophagy inhibition prevents lymphatic malformation progression to lymphangiosarcoma by decreasing osteopontin and Stat3 signaling," Nature Communications, Nature, vol. 14(1), pages 1-15, December.
    17. M. Gabriele Bixel & Kishor K. Sivaraj & Melanie Timmen & Vishal Mohanakrishnan & Anusha Aravamudhan & Susanne Adams & Bong-Ihn Koh & Hyun-Woo Jeong & Kai Kruse & Richard Stange & Ralf H. Adams, 2024. "Angiogenesis is uncoupled from osteogenesis during calvarial bone regeneration," Nature Communications, Nature, vol. 15(1), pages 1-22, December.
    18. Urban Lendahl & Lars Muhl & Christer Betsholtz, 2022. "Identification, discrimination and heterogeneity of fibroblasts," Nature Communications, Nature, vol. 13(1), pages 1-14, December.
    19. Ziye Xu & Tianyu Zhang & Hongyu Chen & Yuyi Zhu & Yuexiao Lv & Shunji Zhang & Jiaye Chen & Haide Chen & Lili Yang & Weiqin Jiang & Shengyu Ni & Fangru Lu & Zhaolun Wang & Hao Yang & Ling Dong & Feng C, 2023. "High-throughput single nucleus total RNA sequencing of formalin-fixed paraffin-embedded tissues by snRandom-seq," Nature Communications, Nature, vol. 14(1), pages 1-12, December.
    20. Taryn D. Treger & John E. G. Lawrence & Nathaniel D. Anderson & Tim H. H. Coorens & Aleksandra Letunovska & Emilie Abby & Henry Lee-Six & Thomas R. W. Oliver & Reem Al-Saadi & Kjell Tullus & Guillaume, 2023. "Targetable NOTCH1 rearrangements in reninoma," Nature Communications, Nature, vol. 14(1), pages 1-10, December.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-46273-0. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.