IDEAS home Printed from https://ideas.repec.org/a/nat/natcom/v15y2024i1d10.1038_s41467-024-45048-x.html
   My bibliography  Save this article

A genomic toolkit for winged bean Psophocarpus tetragonolobus

Author

Listed:
  • Wai Kuan Ho

    (University of Nottingham Malaysia, Jalan Broga
    Crops for the Future (UK) CIC, NIAB)

  • Alberto Stefano Tanzi

    (University of Nottingham, Sutton Bonington Campus)

  • Fei Sang

    (University of Nottingham, Queen’s Medical Centre)

  • Niki Tsoutsoura

    (University of Nottingham, Sutton Bonington Campus)

  • Niraj Shah

    (University of Nottingham, Sutton Bonington Campus)

  • Christopher Moore

    (University of Nottingham, Queen’s Medical Centre)

  • Rahul Bhosale

    (University of Nottingham, Sutton Bonington Campus)

  • Victoria Wright

    (University of Nottingham, Queen’s Medical Centre)

  • Festo Massawe

    (University of Nottingham Malaysia, Jalan Broga)

  • Sean Mayes

    (Crops for the Future (UK) CIC, NIAB
    University of Nottingham, Sutton Bonington Campus
    International Centre for Research in the Semi-Arid Tropics (ICRISAT), Patancheru)

Abstract

A sustainable supply of plant protein is critical for future generations and needs to be achieved while reducing green house gas emissions from agriculture and increasing agricultural resilience in the face of climate volatility. Agricultural diversification with more nutrient-rich and stress tolerant crops could provide the solution. However, this is often hampered by the limited availability of genomic resources and the lack of understanding of the genetic structure of breeding germplasm and the inheritance of important traits. One such crop with potential is winged bean (Psophocarpus tetragonolobus), a high seed protein tropical legume which has been termed ‘the soybean for the tropics’. Here, we present a chromosome level winged bean genome assembly, an investigation of the genetic diversity of 130 worldwide accessions, together with two linked genetic maps and a trait QTL analysis (and expression studies) for regions of the genome with desirable ideotype traits for breeding, namely architecture, protein content and phytonutrients.

Suggested Citation

  • Wai Kuan Ho & Alberto Stefano Tanzi & Fei Sang & Niki Tsoutsoura & Niraj Shah & Christopher Moore & Rahul Bhosale & Victoria Wright & Festo Massawe & Sean Mayes, 2024. "A genomic toolkit for winged bean Psophocarpus tetragonolobus," Nature Communications, Nature, vol. 15(1), pages 1-14, December.
  • Handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-45048-x
    DOI: 10.1038/s41467-024-45048-x
    as

    Download full text from publisher

    File URL: https://www.nature.com/articles/s41467-024-45048-x
    File Function: Abstract
    Download Restriction: no

    File URL: https://libkey.io/10.1038/s41467-024-45048-x?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Tatiana Garcia & Jorge Duitama & Stephanie Smolenski Zullo & Juanita Gil & Andrea Ariani & Sarah Dohle & Antonia Palkovic & Paola Skeen & Clara Isabel Bermudez-Santana & Daniel G. Debouck & Jaime Mart, 2021. "Comprehensive genomic resources related to domestication and crop improvement traits in Lima bean," Nature Communications, Nature, vol. 12(1), pages 1-17, December.
    2. Samira Mafi Moghaddam & Atena Oladzad & Chushin Koh & Larissa Ramsay & John P. Hart & Sujan Mamidi & Genevieve Hoopes & Avinash Sreedasyam & Andrew Wiersma & Dongyan Zhao & Jane Grimwood & John P. Ham, 2021. "The tepary bean genome provides insight into evolution and domestication under heat stress," Nature Communications, Nature, vol. 12(1), pages 1-14, December.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Oluwaseyi Shorinola & Rose Marks & Peter Emmrich & Chris Jones & Damaris Odeny & Mark A. Chapman, 2024. "Integrative and inclusive genomics to promote the use of underutilised crops," Nature Communications, Nature, vol. 15(1), pages 1-4, December.
    2. Dongya Wu & Enhui Shen & Bowen Jiang & Yu Feng & Wei Tang & Sangting Lao & Lei Jia & Han-Yang Lin & Lingjuan Xie & Xifang Weng & Chenfeng Dong & Qinghong Qian & Feng Lin & Haiming Xu & Huabing Lu & Lu, 2022. "Genomic insights into the evolution of Echinochloa species as weed and orphan crop," Nature Communications, Nature, vol. 13(1), pages 1-16, December.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-45048-x. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.