rworkflows: automating reproducible practices for the R community
Author
Abstract
Suggested Citation
DOI: 10.1038/s41467-023-44484-5
Download full text from publisher
References listed on IDEAS
- Michael Lawrence & Wolfgang Huber & Hervé Pagès & Patrick Aboyoun & Marc Carlson & Robert Gentleman & Martin T Morgan & Vincent J Carey, 2013. "Software for Computing and Annotating Genomic Ranges," PLOS Computational Biology, Public Library of Science, vol. 9(8), pages 1-10, August.
- Maria Petrescu & Anjala S. Krishen, 2022. "The evolving crisis of the peer-review process," Journal of Marketing Analytics, Palgrave Macmillan, vol. 10(3), pages 185-186, September.
- Chris Woolston, 2021. "How burnout and imposter syndrome blight scientific careers," Nature, Nature, vol. 599(7886), pages 703-705, November.
- Monya Baker, 2016. "1,500 scientists lift the lid on reproducibility," Nature, Nature, vol. 533(7604), pages 452-454, May.
Most related items
These are the items that most often cite the same works as this one and are cited by the same works as this one.- Dennis Bontempi & Leonard Nuernberg & Suraj Pai & Deepa Krishnaswamy & Vamsi Thiriveedhi & Ahmed Hosny & Raymond H. Mak & Keyvan Farahani & Ron Kikinis & Andrey Fedorov & Hugo J. W. L. Aerts, 2024. "End-to-end reproducible AI pipelines in radiology using the cloud," Nature Communications, Nature, vol. 15(1), pages 1-9, December.
- Poonam Dhillon & Kelly Ann Mulholland & Hailong Hu & Jihwan Park & Xin Sheng & Amin Abedini & Hongbo Liu & Allison Vassalotti & Junnan Wu & Katalin Susztak, 2023. "Increased levels of endogenous retroviruses trigger fibroinflammation and play a role in kidney disease development," Nature Communications, Nature, vol. 14(1), pages 1-20, December.
- Andreas Herchenröther & Stefanie Gossen & Tobias Friedrich & Alexander Reim & Nadine Daus & Felix Diegmüller & Jörg Leers & Hakimeh Moghaddas Sani & Sarah Gerstner & Leah Schwarz & Inga Stellmacher & , 2023. "The H2A.Z and NuRD associated protein HMG20A controls early head and heart developmental transcription programs," Nature Communications, Nature, vol. 14(1), pages 1-20, December.
- Gaylor Boulay & Liliane C. Broye & Rui Dong & Sowmya Iyer & Rajendran Sanalkumar & Yu-Hang Xing & Rémi Buisson & Shruthi Rengarajan & Beverly Naigles & Benoît Duc & Angela Volorio & Mary E. Awad & Raf, 2024. "EWS-WT1 fusion isoforms establish oncogenic programs and therapeutic vulnerabilities in desmoplastic small round cell tumors," Nature Communications, Nature, vol. 15(1), pages 1-17, December.
- Teresa Maria Rosaria Noviello & Anna Maria Giacomo & Francesca Pia Caruso & Alessia Covre & Roberta Mortarini & Giovanni Scala & Maria Claudia Costa & Sandra Coral & Wolf H. Fridman & Catherine Sautès, 2023. "Guadecitabine plus ipilimumab in unresectable melanoma: five-year follow-up and integrated multi-omic analysis in the phase 1b NIBIT-M4 trial," Nature Communications, Nature, vol. 14(1), pages 1-18, December.
- Anjala S. Krishen & Maria Petrescu, 2022. "Is all academic service distributed equally?," Journal of Marketing Analytics, Palgrave Macmillan, vol. 10(4), pages 297-298, December.
- Peter Harremoës, 2019. "Replication Papers," Publications, MDPI, vol. 7(3), pages 1-8, July.
- Xiaohe Lin & Junjie Yin & Yifan Wang & Jing Yao & Qingshun Q. Li & Vit Latzel & Oliver Bossdorf & Yuan-Ye Zhang, 2024. "Environment-induced heritable variations are common in Arabidopsis thaliana," Nature Communications, Nature, vol. 15(1), pages 1-13, December.
- Fernando Hoces de la Guardia & Sean Grant & Edward Miguel, 2021.
"A framework for open policy analysis,"
Science and Public Policy, Oxford University Press, vol. 48(2), pages 154-163.
- Hoces de la Guardia, Fernando & Grant, Sean & Miguel, Edward, 2018. "A Framework for Open Policy Analysis," MetaArXiv jnyqh, Center for Open Science.
- de la Guardia, Fernando Hoces & Grant, Sean & Miguel, Edward, 2021. "A framework for open policy analysis," Department of Economics, Working Paper Series qt05r470xk, Department of Economics, Institute for Business and Economic Research, UC Berkeley.
- Quentin I. B. Lemaître & Natascha Bartsch & Ian U. Kouzel & Henriette Busengdal & Gemma Sian Richards & Patrick R. H. Steinmetz & Fabian Rentzsch, 2023. "NvPrdm14d-expressing neural progenitor cells contribute to non-ectodermal neurogenesis in Nematostella vectensis," Nature Communications, Nature, vol. 14(1), pages 1-18, December.
- Antonella Lanati & Marinella Marzano & Caterina Manzari & Bruno Fosso & Graziano Pesole & Francesca De Leo, 2019. "Management at the service of research: ReOmicS, a quality management system for omics sciences," Palgrave Communications, Palgrave Macmillan, vol. 5(1), pages 1-13, December.
- Songming Tang & Xuejian Cui & Rongxiang Wang & Sijie Li & Siyu Li & Xin Huang & Shengquan Chen, 2024. "scCASE: accurate and interpretable enhancement for single-cell chromatin accessibility sequencing data," Nature Communications, Nature, vol. 15(1), pages 1-16, December.
- Joel Ferguson & Rebecca Littman & Garret Christensen & Elizabeth Levy Paluck & Nicholas Swanson & Zenan Wang & Edward Miguel & David Birke & John-Henry Pezzuto, 2023.
"Survey of open science practices and attitudes in the social sciences,"
Nature Communications, Nature, vol. 14(1), pages 1-13, December.
- Ferguson, Joel & Littman, Rebecca & Christensen, Garret & Paluck, Elizabeth & Swanson, Nicholas & Wang, Zenan & Miguel, Edward & Birke, David & Pezzuto, John-Henry, 2023. "Survey of open science practices and attitudes in the social sciences," Department of Economics, Working Paper Series qt95g5h77z, Department of Economics, Institute for Business and Economic Research, UC Berkeley.
- Thomas F. Heston, 2024. "Redefining Significance: Robustness and Percent Fragility Indices in Biomedical Research," Stats, MDPI, vol. 7(2), pages 1-12, June.
- Raúl F. Pérez & Patricia Tezanos & Alfonso Peñarroya & Alejandro González-Ramón & Rocío G. Urdinguio & Javier Gancedo-Verdejo & Juan Ramón Tejedor & Pablo Santamarina-Ojeda & Juan José Alba-Linares & , 2024. "A multiomic atlas of the aging hippocampus reveals molecular changes in response to environmental enrichment," Nature Communications, Nature, vol. 15(1), pages 1-26, December.
- Erastus Karanja & Aditya Sharma & Ibrahim Salama, 2020. "What does MIS survey research reveal about diversity and representativeness in the MIS field? A content analysis approach," Scientometrics, Springer;Akadémiai Kiadó, vol. 122(3), pages 1583-1628, March.
- Yanming Ren & Zongyao Huang & Lingling Zhou & Peng Xiao & Junwei Song & Ping He & Chuanxing Xie & Ran Zhou & Menghan Li & Xiangqun Dong & Qing Mao & Chao You & Jianguo Xu & Yanhui Liu & Zhigang Lan & , 2023. "Spatial transcriptomics reveals niche-specific enrichment and vulnerabilities of radial glial stem-like cells in malignant gliomas," Nature Communications, Nature, vol. 14(1), pages 1-19, December.
- Tiago C. Luis & Nikolaos Barkas & Joana Carrelha & Alice Giustacchini & Stefania Mazzi & Ruggiero Norfo & Bishan Wu & Affaf Aliouat & Jose A. Guerrero & Alba Rodriguez-Meira & Tiphaine Bouriez-Jones &, 2023. "Perivascular niche cells sense thrombocytopenia and activate hematopoietic stem cells in an IL-1 dependent manner," Nature Communications, Nature, vol. 14(1), pages 1-18, December.
- Bor Luen Tang, 2023. "Some Insights into the Factors Influencing Continuous Citation of Retracted Scientific Papers," Publications, MDPI, vol. 11(4), pages 1-14, October.
- Michael R. Kelly & Kamila Wisniewska & Matthew J. Regner & Michael W. Lewis & Andrea A. Perreault & Eric S. Davis & Douglas H. Phanstiel & Joel S. Parker & Hector L. Franco, 2022. "A multi-omic dissection of super-enhancer driven oncogenic gene expression programs in ovarian cancer," Nature Communications, Nature, vol. 13(1), pages 1-22, December.
Corrections
All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-023-44484-5. See general information about how to correct material in RePEc.
If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.
If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .
If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.
For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .
Please note that corrections may take a couple of weeks to filter through the various RePEc services.