Convergence of resistance and evolutionary responses in Escherichia coli and Salmonella enterica co-inhabiting chicken farms in China
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DOI: 10.1038/s41467-023-44272-1
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- John A. Lees & Minna Vehkala & Niko Välimäki & Simon R. Harris & Claire Chewapreecha & Nicholas J. Croucher & Pekka Marttinen & Mark R. Davies & Andrew C. Steer & Steven Y. C. Tong & Antti Honkela & J, 2016. "Sequence element enrichment analysis to determine the genetic basis of bacterial phenotypes," Nature Communications, Nature, vol. 7(1), pages 1-8, November.
- Jian Sun & Xiao-Ping Liao & Alaric W. D’Souza & Manish Boolchandani & Sheng-Hui Li & Ke Cheng & José Luis Martínez & Liang Li & You-Jun Feng & Liang-Xing Fang & Ting Huang & Jing Xia & Yang Yu & Yu-Fe, 2020. "Environmental remodeling of human gut microbiota and antibiotic resistome in livestock farms," Nature Communications, Nature, vol. 11(1), pages 1-11, December.
- Erol S. Kavvas & Laurence Yang & Jonathan M. Monk & David Heckmann & Bernhard O. Palsson, 2020. "A biochemically-interpretable machine learning classifier for microbial GWAS," Nature Communications, Nature, vol. 11(1), pages 1-11, December.
- An-Ni Zhang & Jeffry M. Gaston & Chengzhen L. Dai & Shijie Zhao & Mathilde Poyet & Mathieu Groussin & Xiaole Yin & Li-Guan Li & Mark C. M. Loosdrecht & Edward Topp & Michael R. Gillings & William P. H, 2021. "An omics-based framework for assessing the health risk of antimicrobial resistance genes," Nature Communications, Nature, vol. 12(1), pages 1-11, December.
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