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Globally distributed Myxococcota with photosynthesis gene clusters illuminate the origin and evolution of a potentially chimeric lifestyle

Author

Listed:
  • Liuyang Li

    (Shanghai Jiao Tong University)

  • Danyue Huang

    (Shanghai Jiao Tong University)

  • Yaoxun Hu

    (Shanghai Jiao Tong University)

  • Nicola M. Rudling

    (University of Liverpool)

  • Daniel P. Canniffe

    (University of Liverpool)

  • Fengping Wang

    (Shanghai Jiao Tong University
    Shanghai Jiao Tong University)

  • Yinzhao Wang

    (Shanghai Jiao Tong University)

Abstract

Photosynthesis is a fundamental biogeochemical process, thought to be restricted to a few bacterial and eukaryotic phyla. However, understanding the origin and evolution of phototrophic organisms can be impeded and biased by the difficulties of cultivation. Here, we analyzed metagenomic datasets and found potential photosynthetic abilities encoded in the genomes of uncultivated bacteria within the phylum Myxococcota. A putative photosynthesis gene cluster encoding a type-II reaction center appears in at least six Myxococcota families from three classes, suggesting vertical inheritance of these genes from an early common ancestor, with multiple independent losses in other lineages. Analysis of metatranscriptomic datasets indicate that the putative myxococcotal photosynthesis genes are actively expressed in various natural environments. Furthermore, heterologous expression of myxococcotal pigment biosynthesis genes in a purple bacterium supports that the genes can drive photosynthetic processes. Given that predatory abilities are thought to be widespread across Myxococcota, our results suggest the intriguing possibility of a chimeric lifestyle (combining predatory and photosynthetic abilities) in members of this phylum.

Suggested Citation

  • Liuyang Li & Danyue Huang & Yaoxun Hu & Nicola M. Rudling & Daniel P. Canniffe & Fengping Wang & Yinzhao Wang, 2023. "Globally distributed Myxococcota with photosynthesis gene clusters illuminate the origin and evolution of a potentially chimeric lifestyle," Nature Communications, Nature, vol. 14(1), pages 1-14, December.
    • Handle: RePEc:nat:natcom:v:14:y:2023:i:1:d:10.1038_s41467-023-42193-7
    DOI: 10.1038/s41467-023-42193-7
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    References listed on IDEAS

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    1. Simon W. Poulton & Andrey Bekker & Vivien M. Cumming & Aubrey L. Zerkle & Donald E. Canfield & David T. Johnston, 2021. "A 200-million-year delay in permanent atmospheric oxygenation," Nature, Nature, vol. 592(7853), pages 232-236, April.
    2. Joanne S. Boden & Kurt O. Konhauser & Leslie J. Robbins & Patricia Sánchez-Baracaldo, 2021. "Timing the evolution of antioxidant enzymes in cyanobacteria," Nature Communications, Nature, vol. 12(1), pages 1-12, December.
    3. Anke Treuner-Lange & Yi-Wei Chang & Timo Glatter & Marco Herfurth & Steffi Lindow & Georges Chreifi & Grant J. Jensen & Lotte Søgaard-Andersen, 2020. "PilY1 and minor pilins form a complex priming the type IVa pilus in Myxococcus xanthus," Nature Communications, Nature, vol. 11(1), pages 1-14, December.
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