IDEAS home Printed from https://ideas.repec.org/a/nat/natcom/v14y2023i1d10.1038_s41467-023-39643-7.html
   My bibliography  Save this article

Loss of the batten disease protein CLN3 leads to mis-trafficking of M6PR and defective autophagic-lysosomal reformation

Author

Listed:
  • Alessia Calcagni’

    (Baylor College of Medicine
    Jan and Dan Duncan Neurological Research Institute, Texas Children’s Hospital)

  • Leopoldo Staiano

    (Telethon Institute of Genetics and Medicine (TIGEM)
    National Research Council (CNR))

  • Nicolina Zampelli

    (Telethon Institute of Genetics and Medicine (TIGEM))

  • Nadia Minopoli

    (Telethon Institute of Genetics and Medicine (TIGEM)
    Federico II University)

  • Niculin J. Herz

    (Baylor College of Medicine
    Jan and Dan Duncan Neurological Research Institute, Texas Children’s Hospital)

  • Giuseppe Tullio

    (Telethon Institute of Genetics and Medicine (TIGEM))

  • Tuong Huynh

    (Baylor College of Medicine
    Jan and Dan Duncan Neurological Research Institute, Texas Children’s Hospital)

  • Jlenia Monfregola

    (Telethon Institute of Genetics and Medicine (TIGEM))

  • Alessandra Esposito

    (Telethon Institute of Genetics and Medicine (TIGEM)
    Federico II University)

  • Carmine Cirillo

    (Telethon Institute of Genetics and Medicine (TIGEM))

  • Aleksandar Bajic

    (Baylor College of Medicine
    Jan and Dan Duncan Neurological Research Institute, Texas Children’s Hospital)

  • Mahla Zahabiyon

    (Baylor College of Medicine
    Jan and Dan Duncan Neurological Research Institute, Texas Children’s Hospital)

  • Rachel Curnock

    (University of Bristol)

  • Elena Polishchuk

    (Telethon Institute of Genetics and Medicine (TIGEM))

  • Luke Parkitny

    (Baylor College of Medicine
    Jan and Dan Duncan Neurological Research Institute, Texas Children’s Hospital)

  • Diego Luis Medina

    (Telethon Institute of Genetics and Medicine (TIGEM)
    Federico II University)

  • Nunzia Pastore

    (Telethon Institute of Genetics and Medicine (TIGEM)
    Federico II University)

  • Peter J. Cullen

    (University of Bristol)

  • Giancarlo Parenti

    (Telethon Institute of Genetics and Medicine (TIGEM)
    Federico II University)

  • Maria Antonietta Matteis

    (Telethon Institute of Genetics and Medicine (TIGEM)
    Federico II University)

  • Paolo Grumati

    (Telethon Institute of Genetics and Medicine (TIGEM)
    Federico II University)

  • Andrea Ballabio

    (Baylor College of Medicine
    Jan and Dan Duncan Neurological Research Institute, Texas Children’s Hospital
    Telethon Institute of Genetics and Medicine (TIGEM)
    Federico II University)

Abstract

Batten disease, one of the most devastating types of neurodegenerative lysosomal storage disorders, is caused by mutations in CLN3. Here, we show that CLN3 is a vesicular trafficking hub connecting the Golgi and lysosome compartments. Proteomic analysis reveals that CLN3 interacts with several endo-lysosomal trafficking proteins, including the cation-independent mannose 6 phosphate receptor (CI-M6PR), which coordinates the targeting of lysosomal enzymes to lysosomes. CLN3 depletion results in mis-trafficking of CI-M6PR, mis-sorting of lysosomal enzymes, and defective autophagic lysosomal reformation. Conversely, CLN3 overexpression promotes the formation of multiple lysosomal tubules, which are autophagy and CI-M6PR-dependent, generating newly formed proto-lysosomes. Together, our findings reveal that CLN3 functions as a link between the M6P-dependent trafficking of lysosomal enzymes and lysosomal reformation pathway, explaining the global impairment of lysosomal function in Batten disease.

Suggested Citation

  • Alessia Calcagni’ & Leopoldo Staiano & Nicolina Zampelli & Nadia Minopoli & Niculin J. Herz & Giuseppe Tullio & Tuong Huynh & Jlenia Monfregola & Alessandra Esposito & Carmine Cirillo & Aleksandar Baj, 2023. "Loss of the batten disease protein CLN3 leads to mis-trafficking of M6PR and defective autophagic-lysosomal reformation," Nature Communications, Nature, vol. 14(1), pages 1-19, December.
  • Handle: RePEc:nat:natcom:v:14:y:2023:i:1:d:10.1038_s41467-023-39643-7
    DOI: 10.1038/s41467-023-39643-7
    as

    Download full text from publisher

    File URL: https://www.nature.com/articles/s41467-023-39643-7
    File Function: Abstract
    Download Restriction: no

    File URL: https://libkey.io/10.1038/s41467-023-39643-7?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Nouf N. Laqtom & Wentao Dong & Uche N. Medoh & Andrew L. Cangelosi & Vimisha Dharamdasani & Sze Ham Chan & Tenzin Kunchok & Caroline A. Lewis & Ivonne Heinze & Rachel Tang & Christian Grimm & An N. Da, 2022. "CLN3 is required for the clearance of glycerophosphodiesters from lysosomes," Nature, Nature, vol. 609(7929), pages 1005-1011, September.
    2. Li Yu & Christina K. McPhee & Lixin Zheng & Gonzalo A. Mardones & Yueguang Rong & Junya Peng & Na Mi & Ying Zhao & Zhihua Liu & Fengyi Wan & Dale W. Hailey & Viola Oorschot & Judith Klumperman & Eric , 2010. "Termination of autophagy and reformation of lysosomes regulated by mTOR," Nature, Nature, vol. 465(7300), pages 942-946, June.
    3. Qiangjun Zhou & Jiangmei Li & Hang Yu & Yujia Zhai & Zhen Gao & Yanxin Liu & Xiaoyun Pang & Lunfeng Zhang & Klaus Schulten & Fei Sun & Chang Chen, 2014. "Molecular insights into the membrane-associated phosphatidylinositol 4-kinase IIα," Nature Communications, Nature, vol. 5(1), pages 1-10, May.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Hong Huang & Qinqin Ouyang & Min Zhu & Haijia Yu & Kunrong Mei & Rong Liu, 2021. "mTOR-mediated phosphorylation of VAMP8 and SCFD1 regulates autophagosome maturation," Nature Communications, Nature, vol. 12(1), pages 1-15, December.
    2. Edoardo Ratto & S. Roy Chowdhury & Nora S. Siefert & Martin Schneider & Marten Wittmann & Dominic Helm & Wilhelm Palm, 2022. "Direct control of lysosomal catabolic activity by mTORC1 through regulation of V-ATPase assembly," Nature Communications, Nature, vol. 13(1), pages 1-15, December.
    3. James L. Daly & Chris M. Danson & Philip A. Lewis & Lu Zhao & Sara Riccardo & Lucio Filippo & Davide Cacchiarelli & Daehoon Lee & Stephen J. Cross & Kate J. Heesom & Wen-Cheng Xiong & Andrea Ballabio , 2023. "Multi-omic approach characterises the neuroprotective role of retromer in regulating lysosomal health," Nature Communications, Nature, vol. 14(1), pages 1-19, December.
    4. Xinran Li & Cong Xiang & Shilei Zhu & Jiansheng Guo & Chang Liu & Ailian Wang & Jin Cao & Yan Lu & Dante Neculai & Pinglong Xu & Xin-Hua Feng, 2024. "SNX8 enables lysosome reformation and reverses lysosomal storage disorder," Nature Communications, Nature, vol. 15(1), pages 1-15, December.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:14:y:2023:i:1:d:10.1038_s41467-023-39643-7. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.