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Genomic signatures associated with maintenance of genome stability and venom turnover in two parasitoid wasps

Author

Listed:
  • Xinhai Ye

    (Zhejiang University
    Zhejiang University
    Zhejiang University)

  • Yi Yang

    (Zhejiang University)

  • Can Zhao

    (Guangdong Provincial Key Laboratory of High Technology for Plant Protection)

  • Shan Xiao

    (Zhejiang University)

  • Yu H. Sun

    (University of Rochester)

  • Chun He

    (Zhejiang University)

  • Shijiao Xiong

    (Zhejiang University)

  • Xianxin Zhao

    (Zhejiang University)

  • Bo Zhang

    (Zhejiang University)

  • Haiwei Lin

    (Zhejiang University)

  • Jiamin Shi

    (Zhejiang University)

  • Yang Mei

    (Zhejiang University)

  • Hongxing Xu

    (Zhejiang Academy of Agricultural Sciences)

  • Qi Fang

    (Zhejiang University)

  • Fei Wu

    (Zhejiang University
    Zhejiang University)

  • Dunsong Li

    (Guangdong Provincial Key Laboratory of High Technology for Plant Protection)

  • Gongyin Ye

    (Zhejiang University)

Abstract

Parasitoid wasps are rapidly developing as a model for evolutionary biology. Here we present chromosomal genomes of two Anastatus wasps, A. japonicus and A. fulloi, and leverage these genomes to study two fundamental questions—genome size evolution and venom evolution. Anastatus shows a much larger genome than is known among other wasps, with unexpectedly recent bursts of LTR retrotransposons. Importantly, several genomic innovations, including Piwi gene family expansion, ubiquitous Piwi expression profiles, as well as transposable element-piRNA coevolution, have likely emerged for transposable element silencing to maintain genomic stability. Additionally, we show that the co-option evolution arose by expression shifts in the venom gland plays a dominant role in venom turnover. We also highlight the potential importance of non-venom genes that are coexpressed with venom genes during venom evolution. Our findings greatly advance the current understanding of genome size evolution and venom evolution, and these genomic resources will facilitate comparative genomics studies of insects in the future.

Suggested Citation

  • Xinhai Ye & Yi Yang & Can Zhao & Shan Xiao & Yu H. Sun & Chun He & Shijiao Xiong & Xianxin Zhao & Bo Zhang & Haiwei Lin & Jiamin Shi & Yang Mei & Hongxing Xu & Qi Fang & Fei Wu & Dunsong Li & Gongyin , 2022. "Genomic signatures associated with maintenance of genome stability and venom turnover in two parasitoid wasps," Nature Communications, Nature, vol. 13(1), pages 1-17, December.
  • Handle: RePEc:nat:natcom:v:13:y:2022:i:1:d:10.1038_s41467-022-34202-y
    DOI: 10.1038/s41467-022-34202-y
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    References listed on IDEAS

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    1. Jeffrey D Allen & Yang Xie & Min Chen & Luc Girard & Guanghua Xiao, 2012. "Comparing Statistical Methods for Constructing Large Scale Gene Networks," PLOS ONE, Public Library of Science, vol. 7(1), pages 1-9, January.
    2. Brian C. Jones & Jason G. Wood & Chengyi Chang & Austin D. Tam & Michael J. Franklin & Emily R. Siegel & Stephen L. Helfand, 2016. "A somatic piRNA pathway in the Drosophila fat body ensures metabolic homeostasis and normal lifespan," Nature Communications, Nature, vol. 7(1), pages 1-9, December.
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