Integrated multi-omics reveals cellular and molecular interactions governing the invasive niche of basal cell carcinoma
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DOI: 10.1038/s41467-022-32670-w
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- Miranda V. Hunter & Reuben Moncada & Joshua M. Weiss & Itai Yanai & Richard M. White, 2021. "Spatially resolved transcriptomics reveals the architecture of the tumor-microenvironment interface," Nature Communications, Nature, vol. 12(1), pages 1-16, December.
- Junyue Cao & Malte Spielmann & Xiaojie Qiu & Xingfan Huang & Daniel M. Ibrahim & Andrew J. Hill & Fan Zhang & Stefan Mundlos & Lena Christiansen & Frank J. Steemers & Cole Trapnell & Jay Shendure, 2019. "The single-cell transcriptional landscape of mammalian organogenesis," Nature, Nature, vol. 566(7745), pages 496-502, February.
- Lei Zhang & Xin Yu & Liangtao Zheng & Yuanyuan Zhang & Yansen Li & Qiao Fang & Ranran Gao & Boxi Kang & Qiming Zhang & Julie Y. Huang & Hiroyasu Konno & Xinyi Guo & Yingjiang Ye & Songyuan Gao & Shan , 2018. "Lineage tracking reveals dynamic relationships of T cells in colorectal cancer," Nature, Nature, vol. 564(7735), pages 268-272, December.
- Mateusz S. Wietecha & Marco Pensalfini & Michael Cangkrama & Bettina Müller & Juyoung Jin & Jürgen Brinckmann & Edoardo Mazza & Sabine Werner, 2020. "Activin-mediated alterations of the fibroblast transcriptome and matrisome control the biomechanical properties of skin wounds," Nature Communications, Nature, vol. 11(1), pages 1-20, December.
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- Yun-Tsan Chang & Pacôme Prompsy & Susanne Kimeswenger & Yi-Chien Tsai & Desislava Ignatova & Olesya Pavlova & Christoph Iselin & Lars E. French & Mitchell P. Levesque & François Kuonen & Malgorzata Bo, 2024. "MHC-I upregulation safeguards neoplastic T cells in the skin against NK cell-mediated eradication in mycosis fungoides," Nature Communications, Nature, vol. 15(1), pages 1-18, December.
- Sabrina Schütz & Llorenç Solé-Boldo & Carlota Lucena-Porcel & Jochen Hoffmann & Alexander Brobeil & Anke S. Lonsdorf & Manuel Rodríguez-Paredes & Frank Lyko, 2023. "Functionally distinct cancer-associated fibroblast subpopulations establish a tumor promoting environment in squamous cell carcinoma," Nature Communications, Nature, vol. 14(1), pages 1-14, December.
- Akshaya Ramakrishnan & Aikaterini Symeonidi & Patrick Hanel & Katharina T. Schmid & Maria L. Richter & Michael Schubert & Maria Colomé-Tatché, 2023. "epiAneufinder identifies copy number alterations from single-cell ATAC-seq data," Nature Communications, Nature, vol. 14(1), pages 1-10, December.
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