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Structural basis for +1 ribosomal frameshifting during EF-G-catalyzed translocation

Author

Listed:
  • Gabriel Demo

    (UMass Medical School
    Masaryk University)

  • Howard B. Gamper

    (Thomas Jefferson University)

  • Anna B. Loveland

    (UMass Medical School)

  • Isao Masuda

    (Thomas Jefferson University)

  • Christine E. Carbone

    (UMass Medical School)

  • Egor Svidritskiy

    (UMass Medical School)

  • Ya-Ming Hou

    (Thomas Jefferson University)

  • Andrei A. Korostelev

    (UMass Medical School)

Abstract

Frameshifting of mRNA during translation provides a strategy to expand the coding repertoire of cells and viruses. How and where in the elongation cycle +1-frameshifting occurs remains poorly understood. We describe seven ~3.5-Å-resolution cryo-EM structures of 70S ribosome complexes, allowing visualization of elongation and translocation by the GTPase elongation factor G (EF-G). Four structures with a + 1-frameshifting-prone mRNA reveal that frameshifting takes place during translocation of tRNA and mRNA. Prior to EF-G binding, the pre-translocation complex features an in-frame tRNA-mRNA pairing in the A site. In the partially translocated structure with EF-G•GDPCP, the tRNA shifts to the +1-frame near the P site, rendering the freed mRNA base to bulge between the P and E sites and to stack on the 16S rRNA nucleotide G926. The ribosome remains frameshifted in the nearly post-translocation state. Our findings demonstrate that the ribosome and EF-G cooperate to induce +1 frameshifting during tRNA-mRNA translocation.

Suggested Citation

  • Gabriel Demo & Howard B. Gamper & Anna B. Loveland & Isao Masuda & Christine E. Carbone & Egor Svidritskiy & Ya-Ming Hou & Andrei A. Korostelev, 2021. "Structural basis for +1 ribosomal frameshifting during EF-G-catalyzed translocation," Nature Communications, Nature, vol. 12(1), pages 1-12, December.
  • Handle: RePEc:nat:natcom:v:12:y:2021:i:1:d:10.1038_s41467-021-24911-1
    DOI: 10.1038/s41467-021-24911-1
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    Cited by:

    1. Panagiotis Poulis & Anoshi Patel & Marina V. Rodnina & Sarah Adio, 2022. "Altered tRNA dynamics during translocation on slippery mRNA as determinant of spontaneous ribosome frameshifting," Nature Communications, Nature, vol. 13(1), pages 1-15, December.
    2. Christine E. Carbone & Anna B. Loveland & Howard B. Gamper & Ya-Ming Hou & Gabriel Demo & Andrei A. Korostelev, 2021. "Time-resolved cryo-EM visualizes ribosomal translocation with EF-G and GTP," Nature Communications, Nature, vol. 12(1), pages 1-13, December.

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