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The amyloid structure of mouse RIPK3 (receptor interacting protein kinase 3) in cell necroptosis

Author

Listed:
  • Xia-lian Wu

    (ShanghaiTech University
    Chinese Academy of Sciences
    University of Chinese Academy of Sciences)

  • Hong Hu

    (ShanghaiTech University
    Chinese Academy of Sciences
    University of Chinese Academy of Sciences)

  • Xing-qi Dong

    (ShanghaiTech University
    Chinese Academy of Sciences
    University of Chinese Academy of Sciences)

  • Jing Zhang

    (ShanghaiTech University
    Chinese Academy of Sciences
    University of Chinese Academy of Sciences)

  • Jian Wang

    (ShanghaiTech University)

  • Charles D. Schwieters

    (National Institutes of Health)

  • Jing Liu

    (ShanghaiTech University
    Chinese Academy of Sciences
    University of Chinese Academy of Sciences)

  • Guo-xiang Wu

    (ShanghaiTech University
    Chinese Academy of Sciences
    University of Chinese Academy of Sciences)

  • Bing Li

    (ShanghaiTech University)

  • Jing-yu Lin

    (ShanghaiTech University
    Chinese Academy of Sciences
    University of Chinese Academy of Sciences)

  • Hua-yi Wang

    (ShanghaiTech University)

  • Jun-xia Lu

    (ShanghaiTech University)

Abstract

RIPK3 amyloid complex plays crucial roles during TNF-induced necroptosis and in response to immune defense in both human and mouse. Here, we have structurally characterized mouse RIPK3 homogeneous self-assembly using solid-state NMR, revealing a well-ordered N-shaped amyloid core structure featured with 3 parallel in-register β-sheets. This structure differs from previously published human RIPK1/RIPK3 hetero-amyloid complex structure, which adopted a serpentine fold. Functional studies indicate both RIPK1-RIPK3 binding and RIPK3 amyloid formation are essential but not sufficient for TNF-induced necroptosis. The structural integrity of RIPK3 fibril with three β-strands is necessary for signaling. Molecular dynamics simulations with a mouse RIPK1/RIPK3 model indicate that the hetero-amyloid is less stable when adopting the RIPK3 fibril conformation, suggesting a structural transformation of RIPK3 from RIPK1-RIPK3 binding to RIPK3 amyloid formation. This structural transformation would provide the missing link connecting RIPK1-RIPK3 binding to RIPK3 homo-oligomer formation in the signal transduction.

Suggested Citation

  • Xia-lian Wu & Hong Hu & Xing-qi Dong & Jing Zhang & Jian Wang & Charles D. Schwieters & Jing Liu & Guo-xiang Wu & Bing Li & Jing-yu Lin & Hua-yi Wang & Jun-xia Lu, 2021. "The amyloid structure of mouse RIPK3 (receptor interacting protein kinase 3) in cell necroptosis," Nature Communications, Nature, vol. 12(1), pages 1-14, December.
  • Handle: RePEc:nat:natcom:v:12:y:2021:i:1:d:10.1038_s41467-021-21881-2
    DOI: 10.1038/s41467-021-21881-2
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    Cited by:

    1. Yanxiang Meng & Katherine A. Davies & Cheree Fitzgibbon & Samuel N. Young & Sarah E. Garnish & Christopher R. Horne & Cindy Luo & Jean-Marc Garnier & Lung-Yu Liang & Angus D. Cowan & Andre L. Samson &, 2021. "Human RIPK3 maintains MLKL in an inactive conformation prior to cell death by necroptosis," Nature Communications, Nature, vol. 12(1), pages 1-15, December.

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