Microbial abundance, activity and population genomic profiling with mOTUs2
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DOI: 10.1038/s41467-019-08844-4
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- Ernestina Hauptfeld & Nikolaos Pappas & Sandra Iwaarden & Basten L. Snoek & Andrea Aldas-Vargas & Bas E. Dutilh & F. A. Bastiaan Meijenfeldt, 2024. "Integrating taxonomic signals from MAGs and contigs improves read annotation and taxonomic profiling of metagenomes," Nature Communications, Nature, vol. 15(1), pages 1-12, December.
- Vincent Somerville & Nadine Thierer & Remo S. Schmidt & Alexandra Roetschi & Lauriane Braillard & Monika Haueter & Hélène Berthoud & Noam Shani & Ueli Ah & Florent Mazel & Philipp Engel, 2024. "Genomic and phenotypic imprints of microbial domestication on cheese starter cultures," Nature Communications, Nature, vol. 15(1), pages 1-12, December.
- Svetlana Kutuzova & Mads Nielsen & Pau Piera & Jakob Nybo Nissen & Simon Rasmussen, 2024. "Taxometer: Improving taxonomic classification of metagenomics contigs," Nature Communications, Nature, vol. 15(1), pages 1-9, December.
- Trine Zachariasen & Jakob Russel & Charisse Petersen & Gisle A. Vestergaard & Shiraz Shah & Pablo Atienza Lopez & Moschoula Passali & Stuart E. Turvey & Søren J. Sørensen & Ole Lund & Jakob Stokholm &, 2024. "MAGinator enables accurate profiling of de novo MAGs with strain-level phylogenies," Nature Communications, Nature, vol. 15(1), pages 1-10, December.
- Rocky D. Payet & Lorelei J. Bilham & Shah Md Tamim Kabir & Serena Monaco & Ash R. Norcott & Mellieha G. E. Allen & Xiao-Yu Zhu & Anthony J. Davy & Charles A. Brearley & Jonathan D. Todd & J. Benjamin , 2024. "Elucidation of Spartina dimethylsulfoniopropionate synthesis genes enables engineering of stress tolerant plants," Nature Communications, Nature, vol. 15(1), pages 1-15, December.
- Corentin Hochart & Lucas Paoli & Hans-Joachim Ruscheweyh & Guillem Salazar & Emilie Boissin & Sarah Romac & Julie Poulain & Guillaume Bourdin & Guillaume Iwankow & Clémentine Moulin & Maren Ziegler & , 2023. "Ecology of Endozoicomonadaceae in three coral genera across the Pacific Ocean," Nature Communications, Nature, vol. 14(1), pages 1-16, December.
- Suguru Nishijima & Naoyoshi Nagata & Yuya Kiguchi & Yasushi Kojima & Tohru Miyoshi-Akiyama & Moto Kimura & Mitsuru Ohsugi & Kohjiro Ueki & Shinichi Oka & Masashi Mizokami & Takao Itoi & Takashi Kawai , 2022. "Extensive gut virome variation and its associations with host and environmental factors in a population-level cohort," Nature Communications, Nature, vol. 13(1), pages 1-14, December.
- Laura Nies & Susheel Bhanu Busi & Mina Tsenkova & Rashi Halder & Elisabeth Letellier & Paul Wilmes, 2022. "Evolution of the murine gut resistome following broad-spectrum antibiotic treatment," Nature Communications, Nature, vol. 13(1), pages 1-11, December.
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