IDEAS home Printed from https://ideas.repec.org/a/eee/thpobi/v155y2024icp67-76.html
   My bibliography  Save this article

Coalescence and sampling distributions for Feller diffusions

Author

Listed:
  • Burden, Conrad J.
  • Griffiths, Robert C.

Abstract

Consider the diffusion process defined by the forward equation ut(t,x)=12{xu(t,x)}xx−α{xu(t,x)}x for t,x≥0 and −∞<α<∞, with an initial condition u(0,x)=δ(x−x0). This equation was introduced and solved by Feller to model the growth of a population of independently reproducing individuals. We explore important coalescent processes related to Feller’s solution. For any α and x0>0 we calculate the distribution of the random variable An(s;t), defined as the finite number of ancestors at a time s in the past of a sample of size n taken from the infinite population of a Feller diffusion at a time t since its initiation. In a subcritical diffusion we find the distribution of population and sample coalescent trees from time t back, conditional on non-extinction as t→∞. In a supercritical diffusion we construct a coalescent tree which has a single founder and derive the distribution of coalescent times.

Suggested Citation

  • Burden, Conrad J. & Griffiths, Robert C., 2024. "Coalescence and sampling distributions for Feller diffusions," Theoretical Population Biology, Elsevier, vol. 155(C), pages 67-76.
  • Handle: RePEc:eee:thpobi:v:155:y:2024:i:c:p:67-76
    DOI: 10.1016/j.tpb.2023.12.001
    as

    Download full text from publisher

    File URL: http://www.sciencedirect.com/science/article/pii/S004058092300076X
    Download Restriction: Full text for ScienceDirect subscribers only

    File URL: https://libkey.io/10.1016/j.tpb.2023.12.001?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Ignatieva, Anastasia & Hein, Jotun & Jenkins, Paul A., 2020. "A characterisation of the reconstructed birth–death process through time rescaling," Theoretical Population Biology, Elsevier, vol. 134(C), pages 61-76.
    2. Burden, Conrad J. & Simon, Helmut, 2016. "Genetic drift in populations governed by a Galton–Watson branching process," Theoretical Population Biology, Elsevier, vol. 109(C), pages 63-74.
    3. Wiuf, Carsten, 2018. "Some properties of the conditioned reconstructed process with Bernoulli sampling," Theoretical Population Biology, Elsevier, vol. 122(C), pages 36-45.
    4. Crespo, Fausto F. & Posada, David & Wiuf, Carsten, 2021. "Coalescent models derived from birth–death processes," Theoretical Population Biology, Elsevier, vol. 142(C), pages 1-11.
    5. Burden, Conrad J. & Soewongsono, Albert C., 2019. "Coalescence in the diffusion limit of a Bienaymé–Galton–Watson branching process," Theoretical Population Biology, Elsevier, vol. 130(C), pages 50-59.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Crespo, Fausto F. & Posada, David & Wiuf, Carsten, 2021. "Coalescent models derived from birth–death processes," Theoretical Population Biology, Elsevier, vol. 142(C), pages 1-11.
    2. Ignatieva, Anastasia & Hein, Jotun & Jenkins, Paul A., 2020. "A characterisation of the reconstructed birth–death process through time rescaling," Theoretical Population Biology, Elsevier, vol. 134(C), pages 61-76.
    3. Burden, Conrad J. & Wei, Yi, 2018. "Mutation in populations governed by a Galton–Watson branching process," Theoretical Population Biology, Elsevier, vol. 120(C), pages 52-61.
    4. Burden, Conrad J. & Tang, Yurong, 2017. "Rate matrix estimation from site frequency data," Theoretical Population Biology, Elsevier, vol. 113(C), pages 23-33.
    5. Burden, Conrad J. & Soewongsono, Albert C., 2019. "Coalescence in the diffusion limit of a Bienaymé–Galton–Watson branching process," Theoretical Population Biology, Elsevier, vol. 130(C), pages 50-59.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:thpobi:v:155:y:2024:i:c:p:67-76. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Catherine Liu (email available below). General contact details of provider: https://www.journals.elsevier.com/intelligence .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.