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Protein contact maps: A binary depiction of protein 3D structures

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  • Emerson, Isaac Arnold
  • Amala, Arumugam

Abstract

In recent years, there has been a considerable interest in examining the structure and dynamics of complex networks. Proteins in 3D space may also be considered as complex systems emerged through the interactions of their constituent amino acids. This representation provides a powerful framework to uncover the general organized principle of protein contact network. Here we reviewed protein contact map in terms of protein structure prediction and analyses. In addition, we had also discussed the various computational techniques for the prediction of protein contact maps and the tools to visualize contact maps.

Suggested Citation

  • Emerson, Isaac Arnold & Amala, Arumugam, 2017. "Protein contact maps: A binary depiction of protein 3D structures," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 465(C), pages 782-791.
    • Handle: RePEc:eee:phsmap:v:465:y:2017:i:c:p:782-791
    DOI: 10.1016/j.physa.2016.08.033
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    References listed on IDEAS

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