IDEAS home Printed from https://ideas.repec.org/a/eee/ecomod/v207y2007i2p251-263.html
   My bibliography  Save this article

Application of an interacting particle filter to improve nitrogen nutrition index predictions for winter wheat

Author

Listed:
  • Naud, Cédric
  • Makowski, David
  • Jeuffroy, Marie-Hélène

Abstract

Dynamic crop models predict several state variables at a daily time step and thus provide useful information for optimizing agricultural techniques. But the prediction errors of these models are often large due to uncertainties in parameters, initial state values, and equations. Monte Carlo sequential methods, like the interacting particle filter [Del Moral, 1996. Nonlinear filtering: interacting particle solution. Markov Process. Relat. Fields 2, 555–580], can be used to update the state variable values predicted by nonlinear dynamic models from a set of measurements and thus reduce the prediction errors. An interesting feature of these methods is that they do not require a linearization of the original nonlinear model. Up to now, these methods have never been applied to complex dynamic crop models. In this paper, the interacting particle filter was used to update the Azodyn model, a dynamic winter wheat crop model, at 10 or 11 dates, from biomass and nitrogen uptake measurements, and to predict a variable of practical interest, the nitrogen nutrition index. We showed that the implementation of this method can reduce the root mean squared error by 66.7–79.7% for the nitrogen nutrition index, but that the filter is highly sensitive to the assumptions made about the probability distribution of the model errors. We also showed that the particle filter gives stable results with 10,000 Monte Carlo simulations and that this number of simulations can be performed in a very reasonable calculation time.

Suggested Citation

  • Naud, Cédric & Makowski, David & Jeuffroy, Marie-Hélène, 2007. "Application of an interacting particle filter to improve nitrogen nutrition index predictions for winter wheat," Ecological Modelling, Elsevier, vol. 207(2), pages 251-263.
  • Handle: RePEc:eee:ecomod:v:207:y:2007:i:2:p:251-263
    DOI: 10.1016/j.ecolmodel.2007.05.003
    as

    Download full text from publisher

    File URL: http://www.sciencedirect.com/science/article/pii/S0304380007002773
    Download Restriction: Full text for ScienceDirect subscribers only

    File URL: https://libkey.io/10.1016/j.ecolmodel.2007.05.003?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Loyce, C. & Rellier, J. P. & Meynard, J. M., 2002. "Management planning for winter wheat with multiple objectives (2): ethanol-wheat production," Agricultural Systems, Elsevier, vol. 72(1), pages 33-57, April.
    2. Moral, P. Del & Guionnet, A., 1998. "Large deviations for interacting particle systems: Applications to non-linear filtering," Stochastic Processes and their Applications, Elsevier, vol. 78(1), pages 69-95, October.
    3. Loyce, C. & Rellier, J. P. & Meynard, J. M., 2002. "Management planning for winter wheat with multiple objectives (1): The BETHA system," Agricultural Systems, Elsevier, vol. 72(1), pages 9-31, April.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Pelosi, Céline & Bertrand, Michel & Makowski, David & Roger-Estrade, Jean, 2008. "WORMDYN: A model of Lumbricus terrestris population dynamics in agricultural fields," Ecological Modelling, Elsevier, vol. 218(3), pages 219-234.
    2. Zhao, Yanxia & Chen, Sining & Shen, Shuanghe, 2013. "Assimilating remote sensing information with crop model using Ensemble Kalman Filter for improving LAI monitoring and yield estimation," Ecological Modelling, Elsevier, vol. 270(C), pages 30-42.
    3. Chen, Yuting & Cournède, Paul-Henry, 2014. "Data assimilation to reduce uncertainty of crop model prediction with Convolution Particle Filtering," Ecological Modelling, Elsevier, vol. 290(C), pages 165-177.
    4. Zhu, Lin & Chen, Jing M. & Qin, Qiming & Li, Jianping & Wang, Lianxi, 2009. "Optimization of ecosystem model parameters using spatio-temporal soil moisture information," Ecological Modelling, Elsevier, vol. 220(18), pages 2121-2136.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Meynard, Jean-Marc & Jeuffroy, Marie-Hélène & Le Bail, Marianne & Lefèvre, Amélie & Magrini, Marie-Benoit & Michon, Camille, 2017. "Designing coupled innovations for the sustainability transition of agrifood systems," Agricultural Systems, Elsevier, vol. 157(C), pages 330-339.
    2. Salembier, Chloé & Segrestin, Blanche & Berthet, Elsa & Weil, Benoît & Meynard, Jean-Marc, 2018. "Genealogy of design reasoning in agronomy: Lessons for supporting the design of agricultural systems," Agricultural Systems, Elsevier, vol. 164(C), pages 277-290.
    3. Machado, Karina Scurupa & Seleme, Robson & Maceno, Marcell M.C. & Zattar, Izabel C., 2017. "Carbon footprint in the ethanol feedstocks cultivation – Agricultural CO2 emission assessment," Agricultural Systems, Elsevier, vol. 157(C), pages 140-145.
    4. Tixier, Philippe & Malézieux, Eric & Dorel, Marc & Wery, Jacques, 2008. "SIMBA, a model for designing sustainable banana-based cropping systems," Agricultural Systems, Elsevier, vol. 97(3), pages 139-150, June.
    5. Blazy, Jean-Marc & Tixier, Philippe & Thomas, Alban & Ozier-Lafontaine, Harry & Salmon, Frédéric & Wery, Jacques, 2010. "BANAD: A farm model for ex ante assessment of agro-ecological innovations and its application to banana farms in Guadeloupe," Agricultural Systems, Elsevier, vol. 103(4), pages 221-232, May.
    6. Douc, R. & Fort, G. & Moulines, E. & Priouret, P., 2009. "Forgetting the initial distribution for Hidden Markov Models," Stochastic Processes and their Applications, Elsevier, vol. 119(4), pages 1235-1256, April.
    7. P. Del Moral & M. Ledoux, 2000. "Convergence of Empirical Processes for Interacting Particle Systems with Applications to Nonlinear Filtering," Journal of Theoretical Probability, Springer, vol. 13(1), pages 225-257, January.
    8. Debaeke, Philippe & Nolot, Jean-Marie & Raffaillac, Didier, 2006. "A rule-based method for the development of crop management systems applied to grain sorghum in south-western France," Agricultural Systems, Elsevier, vol. 90(1-3), pages 180-201, October.
    9. Jie Xiong & Yong Zeng, 2011. "A branching particle approximation to a filtering micromovement model of asset price," Statistical Inference for Stochastic Processes, Springer, vol. 14(2), pages 111-140, May.
    10. Blazy, Jean-Marc & Ozier-Lafontaine, Harry & Doré, Thierry & Thomas, Alban & Wery, Jacques, 2009. "A methodological framework that accounts for farm diversity in the prototyping of crop management systems. Application to banana-based systems in Guadeloupe," Agricultural Systems, Elsevier, vol. 101(1-2), pages 30-41, June.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:ecomod:v:207:y:2007:i:2:p:251-263. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Catherine Liu (email available below). General contact details of provider: http://www.journals.elsevier.com/ecological-modelling .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.