IDEAS home Printed from https://ideas.repec.org/a/eee/chsofr/v87y2016icp19-29.html
   My bibliography  Save this article

Hybrid control on bifurcation for a delayed fractional gene regulatory network

Author

Listed:
  • Huang, Chengdai
  • Cao, Jinde
  • Xiao, Min

Abstract

A novel delayed fractional-order gene regulatory network model is proposed in this paper. Firstly, the sum of delays is chosen as the bifurcation parameter, the conditions of the existence for the Hopf bifurcation are obtained by analyzing the associated characteristic equation. Then, it is the first time that a hybrid controller is designed to control the Hopf bifurcation for the proposed network. It is demonstrated that both fractional order and feedback gain can effectively control the dynamics of such network, the stability domain can be extended under the small fractional order or feedback gain. The controller is enough to delay the onset of the Hopf bifurcation and achieve some desirable dynamical behaviors by changing the appropriate order or feedback gain. Finally, numerical simulations are employed to justify the validity of our theoretical analysis.

Suggested Citation

  • Huang, Chengdai & Cao, Jinde & Xiao, Min, 2016. "Hybrid control on bifurcation for a delayed fractional gene regulatory network," Chaos, Solitons & Fractals, Elsevier, vol. 87(C), pages 19-29.
  • Handle: RePEc:eee:chsofr:v:87:y:2016:i:c:p:19-29
    DOI: 10.1016/j.chaos.2016.02.036
    as

    Download full text from publisher

    File URL: http://www.sciencedirect.com/science/article/pii/S0960077916300674
    Download Restriction: Full text for ScienceDirect subscribers only

    File URL: https://libkey.io/10.1016/j.chaos.2016.02.036?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Shen, Jianwei & Liu, Zengrong & Zheng, Weixing & Xu, Fengdan & Chen, Luonan, 2009. "Oscillatory dynamics in a simple gene regulatory network mediated by small RNAs," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 388(14), pages 2995-3000.
    2. Michael B. Elowitz & Stanislas Leibler, 2000. "A synthetic oscillatory network of transcriptional regulators," Nature, Nature, vol. 403(6767), pages 335-338, January.
    3. Jinglei Tian & Yongguang Yu & Hu Wang, 2014. "Stability and Bifurcation of Two Kinds of Three-Dimensional Fractional Lotka-Volterra Systems," Mathematical Problems in Engineering, Hindawi, vol. 2014, pages 1-8, March.
    4. Perc, Matjaž & Grigolini, Paolo, 2013. "Collective behavior and evolutionary games – An introduction," Chaos, Solitons & Fractals, Elsevier, vol. 56(C), pages 1-5.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Huang, Chengdai & Meng, Yijie & Cao, Jinde & Alsaedi, Ahmed & Alsaadi, Fuad E., 2017. "New bifurcation results for fractional BAM neural network with leakage delay," Chaos, Solitons & Fractals, Elsevier, vol. 100(C), pages 31-44.
    2. Fang, Qingxiang & Peng, Jigen, 2018. "Synchronization of fractional-order linear complex networks with directed coupling topology," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 490(C), pages 542-553.
    3. Zhou, Weigang & Huang, Chengdai & Xiao, Min & Cao, Jinde, 2019. "Hybrid tactics for bifurcation control in a fractional-order delayed predator–prey model," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 515(C), pages 183-191.
    4. Huang, Chengdai & Cao, Jinde & Xiao, Min & Alsaedi, Ahmed & Hayat, Tasawar, 2017. "Bifurcations in a delayed fractional complex-valued neural network," Applied Mathematics and Computation, Elsevier, vol. 292(C), pages 210-227.
    5. Li, Peiluan & Gao, Rong & Xu, Changjin & Ahmad, Shabir & Li, Ying & Akgül, Ali, 2023. "Bifurcation behavior and PDγ control mechanism of a fractional delayed genetic regulatory model," Chaos, Solitons & Fractals, Elsevier, vol. 168(C).
    6. Kaslik, Eva & Rădulescu, Ileana Rodica, 2022. "Stability and bifurcations in fractional-order gene regulatory networks," Applied Mathematics and Computation, Elsevier, vol. 421(C).
    7. Bahrampour, Elham & Asemani, Mohammad Hassan & Dehghani, Maryam, 2023. "Robust global synchronization of delayed incommensurate fractional-order gene regulatory networks," Chaos, Solitons & Fractals, Elsevier, vol. 172(C).
    8. Arjunan, Mani Mallika & Abdeljawad, Thabet & Anbalagan, Pratap, 2022. "Impulsive effects on fractional order time delayed gene regulatory networks: Asymptotic stability analysis," Chaos, Solitons & Fractals, Elsevier, vol. 154(C).
    9. Huang, Chengdai & Cao, Jinde & Xiao, Min & Alsaedi, Ahmed & Alsaadi, Fuad E., 2017. "Controlling bifurcation in a delayed fractional predator–prey system with incommensurate orders," Applied Mathematics and Computation, Elsevier, vol. 293(C), pages 293-310.
    10. Xu, Changjin & Liao, Maoxin & Li, Peiluan & Yuan, Shuai, 2021. "Impact of leakage delay on bifurcation in fractional-order complex-valued neural networks," Chaos, Solitons & Fractals, Elsevier, vol. 142(C).
    11. Narayanan, G. & Syed Ali, M. & Karthikeyan, Rajagopal & Rajchakit, Grienggrai & Jirawattanapanit, Anuwat, 2022. "Novel adaptive strategies for synchronization control mechanism in nonlinear dynamic fuzzy modeling of fractional-order genetic regulatory networks," Chaos, Solitons & Fractals, Elsevier, vol. 165(P1).
    12. Huang, Chengdai, 2018. "Multiple scales scheme for bifurcation in a delayed extended van der Pol oscillator," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 490(C), pages 643-652.
    13. Li, Hong-Li & Hu, Cheng & Jiang, Yao-Lin & Wang, Zuolei & Teng, Zhidong, 2016. "Pinning adaptive and impulsive synchronization of fractional-order complex dynamical networks," Chaos, Solitons & Fractals, Elsevier, vol. 92(C), pages 142-149.
    14. Yang, Juanping & Sheng, Yuhong & Li, Hong-Li & Hu, Cheng, 2023. "Stability and adaptive control-based synchronization of delayed uncertain fractional-order gene regulatory networks," Chaos, Solitons & Fractals, Elsevier, vol. 174(C).
    15. Zhang, Yan-Jie & Liu, Song & Yang, Ran & Tan, Ying-Ying & Li, Xiaoyan, 2019. "Global synchronization of fractional coupled networks with discrete and distributed delays," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 514(C), pages 830-837.
    16. repec:taf:tsysxx:v:48:y:2017:i:7:p:1460-1471 is not listed on IDEAS

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Zhdanov, Vladimir P., 2012. "Periodic perturbation of genetic oscillations," Chaos, Solitons & Fractals, Elsevier, vol. 45(5), pages 577-587.
    2. Jin Wang & Bo Huang & Xuefeng Xia & Zhirong Sun, 2006. "Funneled Landscape Leads to Robustness of Cell Networks: Yeast Cell Cycle," PLOS Computational Biology, Public Library of Science, vol. 2(11), pages 1-10, November.
    3. Ankit Gupta & Mustafa Khammash, 2022. "Frequency spectra and the color of cellular noise," Nature Communications, Nature, vol. 13(1), pages 1-18, December.
    4. Bottani, Samuel & Grammaticos, Basile, 2008. "A simple model of genetic oscillations through regulated degradation," Chaos, Solitons & Fractals, Elsevier, vol. 38(5), pages 1468-1482.
    5. Margherita Carletti & Malay Banerjee, 2019. "A Backward Technique for Demographic Noise in Biological Ordinary Differential Equation Models," Mathematics, MDPI, vol. 7(12), pages 1-16, December.
    6. Konstantinos I Papadimitriou & Guy-Bart V Stan & Emmanuel M Drakakis, 2013. "Systematic Computation of Nonlinear Cellular and Molecular Dynamics with Low-Power CytoMimetic Circuits: A Simulation Study," PLOS ONE, Public Library of Science, vol. 8(2), pages 1-24, February.
    7. Inés P Mariño & Alexey Zaikin & Joaquín Míguez, 2017. "A comparison of Monte Carlo-based Bayesian parameter estimation methods for stochastic models of genetic networks," PLOS ONE, Public Library of Science, vol. 12(8), pages 1-25, August.
    8. T. Ochiai & J. C. Nacher, 2007. "Stochastic analysis of autoregulatory gene expression dynamics," Mathematical and Computer Modelling of Dynamical Systems, Taylor & Francis Journals, vol. 14(4), pages 377-388, November.
    9. Gabriele Lillacci & Mustafa Khammash, 2010. "Parameter Estimation and Model Selection in Computational Biology," PLOS Computational Biology, Public Library of Science, vol. 6(3), pages 1-17, March.
    10. Cheng, Guifang & Liu, Hao, 2024. "Asynchronous finite-time extended dissipative sliding mode control for semi-Markovian jump master–slave neural networks," Chaos, Solitons & Fractals, Elsevier, vol. 179(C).
    11. Simeon D. Castle & Michiel Stock & Thomas E. Gorochowski, 2024. "Engineering is evolution: a perspective on design processes to engineer biology," Nature Communications, Nature, vol. 15(1), pages 1-10, December.
    12. Tai-Yin Chiu & Hui-Ju K Chiang & Ruei-Yang Huang & Jie-Hong R Jiang & François Fages, 2015. "Synthesizing Configurable Biochemical Implementation of Linear Systems from Their Transfer Function Specifications," PLOS ONE, Public Library of Science, vol. 10(9), pages 1-27, September.
    13. Padmaja, N. & Balasubramaniam, P., 2022. "Mixed H∞/passivity based stability analysis of fractional-order gene regulatory networks with variable delays," Mathematics and Computers in Simulation (MATCOM), Elsevier, vol. 192(C), pages 167-181.
    14. Liu, Xian & Wang, Jinzhi & Huang, Lin, 2007. "Global synchronization for a class of dynamical complex networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 386(1), pages 543-556.
    15. Tobias May & Lee Eccleston & Sabrina Herrmann & Hansjörg Hauser & Jorge Goncalves & Dagmar Wirth, 2008. "Bimodal and Hysteretic Expression in Mammalian Cells from a Synthetic Gene Circuit," PLOS ONE, Public Library of Science, vol. 3(6), pages 1-7, June.
    16. Ehigie, Julius O. & Luan, Vu Thai & Okunuga, Solomon A. & You, Xiong, 2022. "Exponentially fitted two-derivative DIRK methods for oscillatory differential equations," Applied Mathematics and Computation, Elsevier, vol. 418(C).
    17. Zomorrodi, Ali R. & Maranas, Costas D., 2014. "Coarse-grained optimization-driven design and piecewise linear modeling of synthetic genetic circuits," European Journal of Operational Research, Elsevier, vol. 237(2), pages 665-676.
    18. Keun-Young Kim & Jin Wang, 2007. "Potential Energy Landscape and Robustness of a Gene Regulatory Network: Toggle Switch," PLOS Computational Biology, Public Library of Science, vol. 3(3), pages 1-13, March.
    19. Liu, Xian & Wang, Jinzhi & Huang, Lin, 2007. "Stabilization of a class of dynamical complex networks based on decentralized control," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 383(2), pages 733-744.
    20. Lukas Aufinger & Johann Brenner & Friedrich C. Simmel, 2022. "Complex dynamics in a synchronized cell-free genetic clock," Nature Communications, Nature, vol. 13(1), pages 1-9, December.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:chsofr:v:87:y:2016:i:c:p:19-29. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Thayer, Thomas R. (email available below). General contact details of provider: https://www.journals.elsevier.com/chaos-solitons-and-fractals .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.