IDEAS home Printed from https://ideas.repec.org/a/bpj/sagmbi/v4y2005i1n33.html
   My bibliography  Save this article

Structured Antedependence Models for Functional Mapping of Multiple Longitudinal Traits

Author

Listed:
  • Zhao Wei

    (University of Florida)

  • Hou Wei

    (University of Florida)

  • Littell Ramon C.

    (University of Florida)

  • Wu Rongling

    (University of Florida)

Abstract

In this article, we present a statistical model for mapping quantitative trait loci (QTL) that determine growth trajectories of two correlated traits during ontogenetic development. This model is derived within the maximum likelihood context, incorporated by mathematical aspects of growth processes to model the mean vector and by structured antedependence (SAD) models to approximate time-dependent covariance matrices for longitudinal traits. It provides a quantitative framework for testing the relative importance of two mechanisms, pleiotropy and linkage, in contributing to genetic correlations during ontogeny. This model has been employed to map QTL affecting stem height and diameter growth trajectories in an interspecific hybrid progeny of Populus, leading to the successful discovery of three pleiotropic QTL on different linkage groups. The implications of this model for genetic mapping within a broader context are discussed.

Suggested Citation

  • Zhao Wei & Hou Wei & Littell Ramon C. & Wu Rongling, 2005. "Structured Antedependence Models for Functional Mapping of Multiple Longitudinal Traits," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 4(1), pages 1-28, November.
  • Handle: RePEc:bpj:sagmbi:v:4:y:2005:i:1:n:33
    DOI: 10.2202/1544-6115.1136
    as

    Download full text from publisher

    File URL: https://doi.org/10.2202/1544-6115.1136
    Download Restriction: For access to full text, subscription to the journal or payment for the individual article is required.

    File URL: https://libkey.io/10.2202/1544-6115.1136?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Kohli, Priya & Garcia, Tanya P. & Pourahmadi, Mohsen, 2016. "Modeling the Cholesky factors of covariance matrices of multivariate longitudinal data," Journal of Multivariate Analysis, Elsevier, vol. 145(C), pages 87-100.
    2. Jiguo Cao & Liangliang Wang & Zhongwen Huang & Junyi Gai & Rongling Wu, 2017. "Functional Mapping of Multiple Dynamic Traits," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 22(1), pages 60-75, March.
    3. Kim, Chulmin & Zimmerman, Dale L., 2012. "Unconstrained models for the covariance structure of multivariate longitudinal data," Journal of Multivariate Analysis, Elsevier, vol. 107(C), pages 104-118.
    4. Feng, Sanying & Lian, Heng & Xue, Liugen, 2016. "A new nested Cholesky decomposition and estimation for the covariance matrix of bivariate longitudinal data," Computational Statistics & Data Analysis, Elsevier, vol. 102(C), pages 98-109.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:bpj:sagmbi:v:4:y:2005:i:1:n:33. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    We have no bibliographic references for this item. You can help adding them by using this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Peter Golla (email available below). General contact details of provider: https://www.degruyter.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.