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A Redundancy Detection Approach To Mining Bioinformatics Data

In: Computer Aided Methods In Optimal Design And Operations

Author

Listed:
  • H. CAMACHO

    (University of Essex, Wivenhoe Park, Colchester CO4 3SQ, United Kingdom)

  • A. SALHI

    (University of Essex, Wivenhoe Park, Colchester CO4 3SQ, United Kingdom)

Abstract

This paper is concerned with the search for sequences of DNA bases via the solution of the key equivalence problem. The approach is related to the hardening of soft databases method due to Cohen et al.1 Here, the problem is described in graph theoretic terms. An appropriate optimization model is drawn and solved indirectly. This approach is shown to be effective. Computational results on bioinformatics databases are included.

Suggested Citation

  • H. Camacho & A. Salhi, 2006. "A Redundancy Detection Approach To Mining Bioinformatics Data," World Scientific Book Chapters, in: I D L Bogle & J Žilinskas (ed.), Computer Aided Methods In Optimal Design And Operations, chapter 10, pages 89-98, World Scientific Publishing Co. Pte. Ltd..
    • Handle: RePEc:wsi:wschap:9789812772954_0010
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