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A Novel Approach for Prediction of Vitamin D Status Using Support Vector Regression

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  • Shuyu Guo
  • Robyn M Lucas
  • Anne-Louise Ponsonby
  • the Ausimmune Investigator Group

Abstract

Background: Epidemiological evidence suggests that vitamin D deficiency is linked to various chronic diseases. However direct measurement of serum 25-hydroxyvitamin D (25(OH)D) concentration, the accepted biomarker of vitamin D status, may not be feasible in large epidemiological studies. An alternative approach is to estimate vitamin D status using a predictive model based on parameters derived from questionnaire data. In previous studies, models developed using Multiple Linear Regression (MLR) have explained a limited proportion of the variance and predicted values have correlated only modestly with measured values. Here, a new modelling approach, nonlinear radial basis function support vector regression (RBF SVR), was used in prediction of serum 25(OH)D concentration. Predicted scores were compared with those from a MLR model. Methods: Determinants of serum 25(OH)D in Caucasian adults (n = 494) that had been previously identified were modelled using MLR and RBF SVR to develop a 25(OH)D prediction score and then validated in an independent dataset. The correlation between actual and predicted serum 25(OH)D concentrations was analysed with a Pearson correlation coefficient. Results: Better correlation was observed between predicted scores and measured 25(OH)D concentrations using the RBF SVR model in comparison with MLR (Pearson correlation coefficient: 0.74 for RBF SVR; 0.51 for MLR). The RBF SVR model was more accurately able to identify individuals with lower 25(OH)D levels (

Suggested Citation

  • Shuyu Guo & Robyn M Lucas & Anne-Louise Ponsonby & the Ausimmune Investigator Group, 2013. "A Novel Approach for Prediction of Vitamin D Status Using Support Vector Regression," PLOS ONE, Public Library of Science, vol. 8(11), pages 1-9, November.
  • Handle: RePEc:plo:pone00:0079970
    DOI: 10.1371/journal.pone.0079970
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    Cited by:

    1. Carmen Patino-Alonso & Marta Gómez-Sánchez & Leticia Gómez-Sánchez & Benigna Sánchez Salgado & Emiliano Rodríguez-Sánchez & Luis García-Ortiz & Manuel A. Gómez-Marcos, 2022. "Predictive Ability of Machine-Learning Methods for Vitamin D Deficiency Prediction by Anthropometric Parameters," Mathematics, MDPI, vol. 10(4), pages 1-16, February.

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