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A Novel Serum Metabolomics-Based Diagnostic Approach for Colorectal Cancer

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Listed:
  • Shin Nishiumi
  • Takashi Kobayashi
  • Atsuki Ikeda
  • Tomoo Yoshie
  • Megumi Kibi
  • Yoshihiro Izumi
  • Tatsuya Okuno
  • Nobuhide Hayashi
  • Seiji Kawano
  • Tadaomi Takenawa
  • Takeshi Azuma
  • Masaru Yoshida

Abstract

Background: To improve the quality of life of colorectal cancer patients, it is important to establish new screening methods for early diagnosis of colorectal cancer. Methodology/Principal Findings: We performed serum metabolome analysis using gas-chromatography/mass-spectrometry (GC/MS). First, the accuracy of our GC/MS-based serum metabolomic analytical method was evaluated by calculating the RSD% values of serum levels of various metabolites. Second, the intra-day (morning, daytime, and night) and inter-day (among 3 days) variances of serum metabolite levels were examined. Then, serum metabolite levels were compared between colorectal cancer patients (N = 60; N = 12 for each stage from 0 to 4) and age- and sex-matched healthy volunteers (N = 60) as a training set. The metabolites whose levels displayed significant changes were subjected to multiple logistic regression analysis using the stepwise variable selection method, and a colorectal cancer prediction model was established. The prediction model was composed of 2-hydroxybutyrate, aspartic acid, kynurenine, and cystamine, and its AUC, sensitivity, specificity, and accuracy were 0.9097, 85.0%, 85.0%, and 85.0%, respectively, according to the training set data. In contrast, the sensitivity, specificity, and accuracy of CEA were 35.0%, 96.7%, and 65.8%, respectively, and those of CA19-9 were 16.7%, 100%, and 58.3%, respectively. The validity of the prediction model was confirmed using colorectal cancer patients (N = 59) and healthy volunteers (N = 63) as a validation set. At the validation set, the sensitivity, specificity, and accuracy of the prediction model were 83.1%, 81.0%, and 82.0%, respectively, and these values were almost the same as those obtained with the training set. In addition, the model displayed high sensitivity for detecting stage 0–2 colorectal cancer (82.8%). Conclusions/Significance: Our prediction model established via GC/MS-based serum metabolomic analysis is valuable for early detection of colorectal cancer and has the potential to become a novel screening test for colorectal cancer.

Suggested Citation

  • Shin Nishiumi & Takashi Kobayashi & Atsuki Ikeda & Tomoo Yoshie & Megumi Kibi & Yoshihiro Izumi & Tatsuya Okuno & Nobuhide Hayashi & Seiji Kawano & Tadaomi Takenawa & Takeshi Azuma & Masaru Yoshida, 2012. "A Novel Serum Metabolomics-Based Diagnostic Approach for Colorectal Cancer," PLOS ONE, Public Library of Science, vol. 7(7), pages 1-10, July.
  • Handle: RePEc:plo:pone00:0040459
    DOI: 10.1371/journal.pone.0040459
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    1. Arun Sreekumar & Laila M. Poisson & Thekkelnaycke M. Rajendiran & Amjad P. Khan & Qi Cao & Jindan Yu & Bharathi Laxman & Rohit Mehra & Robert J. Lonigro & Yong Li & Mukesh K. Nyati & Aarif Ahsan & Sha, 2009. "Metabolomic profiles delineate potential role for sarcosine in prostate cancer progression," Nature, Nature, vol. 457(7231), pages 910-914, February.
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    1. Yangzi Chen & Bohong Wang & Yizi Zhao & Xinxin Shao & Mingshuo Wang & Fuhai Ma & Laishou Yang & Meng Nie & Peng Jin & Ke Yao & Haibin Song & Shenghan Lou & Hang Wang & Tianshu Yang & Yantao Tian & Pen, 2024. "Metabolomic machine learning predictor for diagnosis and prognosis of gastric cancer," Nature Communications, Nature, vol. 15(1), pages 1-13, December.

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