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Persistence and Adaptation in Immunity: T Cells Balance the Extent and Thoroughness of Search

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  • G Matthew Fricke
  • Kenneth A Letendre
  • Melanie E Moses
  • Judy L Cannon

Abstract

Effective search strategies have evolved in many biological systems, including the immune system. T cells are key effectors of the immune response, required for clearance of pathogenic infection. T cell activation requires that T cells encounter antigen-bearing dendritic cells within lymph nodes, thus, T cell search patterns within lymph nodes may be a crucial determinant of how quickly a T cell immune response can be initiated. Previous work suggests that T cell motion in the lymph node is similar to a Brownian random walk, however, no detailed analysis has definitively shown whether T cell movement is consistent with Brownian motion. Here, we provide a precise description of T cell motility in lymph nodes and a computational model that demonstrates how motility impacts T cell search efficiency. We find that both Brownian and Lévy walks fail to capture the complexity of T cell motion. Instead, T cell movement is better described as a correlated random walk with a heavy-tailed distribution of step lengths. Using computer simulations, we identify three distinct factors that contribute to increasing T cell search efficiency: 1) a lognormal distribution of step lengths, 2) motion that is directionally persistent over short time scales, and 3) heterogeneity in movement patterns. Furthermore, we show that T cells move differently in specific frequently visited locations that we call “hotspots” within lymph nodes, suggesting that T cells change their movement in response to the lymph node environment. Our results show that like foraging animals, T cells adapt to environmental cues, suggesting that adaption is a fundamental feature of biological search.Author Summary: The immune system is responsible for clearing disease-causing infections, and T cells are an important immune cell type that helps eliminate viruses and bacteria. To become activated, T cells must encounter another type of immune cell called dendritic cells in the lymph node. T cell search for dendritic cells is similar to animal search for food. Here we precisely analyze how T cells move using search patterns originally developed to describe animals. We find that T cell motion is a complex combination of multiple strategies including moving in a persistent direction and using different step sizes. This allows T cells to balance the need to search both extensively throughout the lymph node and also to search some regions thoroughly for possible infection. Furthermore, we use a computer model to demonstrate that T cells are more likely to be found in specific locations in lymph nodes. We call these locations “hotspots”. We find that T cells in hotspots move differently, apparently searching more thoroughly, suggesting that T cells can adapt to their environment, similar to animals foraging for food. These results show that T cells share fundamental search strategies with foraging animals, exhibiting both persistence and adaptation.

Suggested Citation

  • G Matthew Fricke & Kenneth A Letendre & Melanie E Moses & Judy L Cannon, 2016. "Persistence and Adaptation in Immunity: T Cells Balance the Extent and Thoroughness of Search," PLOS Computational Biology, Public Library of Science, vol. 12(3), pages 1-23, March.
  • Handle: RePEc:plo:pcbi00:1004818
    DOI: 10.1371/journal.pcbi.1004818
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    References listed on IDEAS

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    1. Johannes Textor & Sarah E Henrickson & Judith N Mandl & Ulrich H von Andrian & Jürgen Westermann & Rob J de Boer & Joost B Beltman, 2014. "Random Migration and Signal Integration Promote Rapid and Robust T Cell Recruitment," PLOS Computational Biology, Public Library of Science, vol. 10(8), pages 1-16, August.
    2. M. Goldstein & S. Morris & G. Yen, 2004. "Problems with fitting to the power-law distribution," The European Physical Journal B: Condensed Matter and Complex Systems, Springer;EDP Sciences, vol. 41(2), pages 255-258, September.
    3. Thorsten R. Mempel & Sarah E. Henrickson & Ulrich H. von Andrian, 2004. "T-cell priming by dendritic cells in lymph nodes occurs in three distinct phases," Nature, Nature, vol. 427(6970), pages 154-159, January.
    4. Kenneth Letendre & Emmanuel Donnadieu & Melanie E Moses & Judy L Cannon, 2015. "Bringing Statistics Up to Speed with Data in Analysis of Lymphocyte Motility," PLOS ONE, Public Library of Science, vol. 10(5), pages 1-18, May.
    5. Edward J Banigan & Tajie H Harris & David A Christian & Christopher A Hunter & Andrea J Liu, 2015. "Heterogeneous CD8+ T Cell Migration in the Lymph Node in the Absence of Inflammation Revealed by Quantitative Migration Analysis," PLOS Computational Biology, Public Library of Science, vol. 11(2), pages 1-20, February.
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    1. Gustave Ronteix & Shreyansh Jain & Christelle Angely & Marine Cazaux & Roxana Khazen & Philippe Bousso & Charles N. Baroud, 2022. "High resolution microfluidic assay and probabilistic modeling reveal cooperation between T cells in tumor killing," Nature Communications, Nature, vol. 13(1), pages 1-13, December.

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