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γδ T cells are effectors of immunotherapy in cancers with HLA class I defects

Author

Listed:
  • Natasja L. Vries

    (Leiden University Medical Center
    Leiden University Medical Center)

  • Joris Haar

    (Netherlands Cancer Institute
    Oncode Institute
    Netherlands Cancer Institute)

  • Vivien Veninga

    (Netherlands Cancer Institute
    Oncode Institute)

  • Myriam Chalabi

    (Netherlands Cancer Institute
    Netherlands Cancer Institute
    Netherlands Cancer Institute)

  • Marieke E. Ijsselsteijn

    (Leiden University Medical Center)

  • Manon Ploeg

    (Leiden University Medical Center)

  • Jitske Bulk

    (Leiden University Medical Center)

  • Dina Ruano

    (Leiden University Medical Center)

  • Jose G. Berg

    (Netherlands Cancer Institute)

  • John B. Haanen

    (Netherlands Cancer Institute
    Netherlands Cancer Institute)

  • Laurien J. Zeverijn

    (Netherlands Cancer Institute
    Oncode Institute)

  • Birgit S. Geurts

    (Netherlands Cancer Institute
    Oncode Institute)

  • Gijs F. Wit

    (Netherlands Cancer Institute
    Oncode Institute)

  • Thomas W. Battaglia

    (Netherlands Cancer Institute
    Oncode Institute)

  • Hans Gelderblom

    (Leiden University Medical Center)

  • Henk M. W. Verheul

    (Erasmus MC)

  • Ton N. Schumacher

    (Netherlands Cancer Institute
    Oncode Institute
    Leiden University Medical Center)

  • Lodewyk F. A. Wessels

    (Oncode Institute
    Netherlands Cancer Institute
    Delft University of Technology)

  • Frits Koning

    (Leiden University Medical Center)

  • Noel F. C. C. Miranda

    (Leiden University Medical Center)

  • Emile E. Voest

    (Netherlands Cancer Institute
    Oncode Institute)

Abstract

DNA mismatch repair-deficient (MMR-d) cancers present an abundance of neoantigens that is thought to explain their exceptional responsiveness to immune checkpoint blockade (ICB)1,2. Here, in contrast to other cancer types3–5, we observed that 20 out of 21 (95%) MMR-d cancers with genomic inactivation of β2-microglobulin (encoded by B2M) retained responsiveness to ICB, suggesting the involvement of immune effector cells other than CD8+ T cells in this context. We next identified a strong association between B2M inactivation and increased infiltration by γδ T cells in MMR-d cancers. These γδ T cells mainly comprised the Vδ1 and Vδ3 subsets, and expressed high levels of PD-1, other activation markers, including cytotoxic molecules, and a broad repertoire of killer-cell immunoglobulin-like receptors. In vitro, PD-1+ γδ T cells that were isolated from MMR-d colon cancers exhibited enhanced reactivity to human leukocyte antigen (HLA)-class-I-negative MMR-d colon cancer cell lines and B2M-knockout patient-derived tumour organoids compared with antigen-presentation-proficient cells. By comparing paired tumour samples from patients with MMR-d colon cancer that were obtained before and after dual PD-1 and CTLA-4 blockade, we found that immune checkpoint blockade substantially increased the frequency of γδ T cells in B2M-deficient cancers. Taken together, these data indicate that γδ T cells contribute to the response to immune checkpoint blockade in patients with HLA-class-I-negative MMR-d colon cancers, and underline the potential of γδ T cells in cancer immunotherapy.

Suggested Citation

  • Natasja L. Vries & Joris Haar & Vivien Veninga & Myriam Chalabi & Marieke E. Ijsselsteijn & Manon Ploeg & Jitske Bulk & Dina Ruano & Jose G. Berg & John B. Haanen & Laurien J. Zeverijn & Birgit S. Geu, 2023. "γδ T cells are effectors of immunotherapy in cancers with HLA class I defects," Nature, Nature, vol. 613(7945), pages 743-750, January.
  • Handle: RePEc:nat:nature:v:613:y:2023:i:7945:d:10.1038_s41586-022-05593-1
    DOI: 10.1038/s41586-022-05593-1
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