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Structural basis of glutamate recognition by a dimeric metabotropic glutamate receptor

Author

Listed:
  • Naoki Kunishima

    (Departments of Structural Biology
    Structural Biophysics Laboratory, RIKEN Harima Institute)

  • Yoshimi Shimada

    (Molecular Biology, Biomolecular Engineering Research Institute)

  • Yuji Tsuji

    (Molecular Biology, Biomolecular Engineering Research Institute)

  • Toshihiro Sato

    (Molecular Biology, Biomolecular Engineering Research Institute)

  • Masaki Yamamoto

    (Structural Biophysics Laboratory, RIKEN Harima Institute)

  • Takashi Kumasaka

    (Structural Biophysics Laboratory, RIKEN Harima Institute)

  • Shigetada Nakanishi

    (Department of Biological Sciences Kyoto University Faculty of Medicine)

  • Hisato Jingami

    (Molecular Biology, Biomolecular Engineering Research Institute)

  • Kosuke Morikawa

    (Departments of Structural Biology)

Abstract

The metabotropic glutamate receptors (mGluRs) are key receptors in the modulation of excitatory synaptic transmission in the central nervous system. Here we have determined three different crystal structures of the extracellular ligand-binding region of mGluR1—in a complex with glutamate and in two unliganded forms. They all showed disulphide-linked homodimers, whose ‘active’ and ‘resting’ conformations are modulated through the dimeric interface by a packed α-helical structure. The bi-lobed protomer architectures flexibly change their domain arrangements to form an ‘open’ or ‘closed’ conformation. The structures imply that glutamate binding stabilizes both the ‘active’ dimer and the ‘closed’ protomer in dynamic equilibrium. Movements of the four domains in the dimer are likely to affect the separation of the transmembrane and intracellular regions, and thereby activate the receptor. This scheme in the initial receptor activation could be applied generally to G-protein-coupled neurotransmitter receptors that possess extracellular ligand-binding sites.

Suggested Citation

  • Naoki Kunishima & Yoshimi Shimada & Yuji Tsuji & Toshihiro Sato & Masaki Yamamoto & Takashi Kumasaka & Shigetada Nakanishi & Hisato Jingami & Kosuke Morikawa, 2000. "Structural basis of glutamate recognition by a dimeric metabotropic glutamate receptor," Nature, Nature, vol. 407(6807), pages 971-977, October.
  • Handle: RePEc:nat:nature:v:407:y:2000:i:6807:d:10.1038_35039564
    DOI: 10.1038/35039564
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    Cited by:

    1. Kento Ojima & Wataru Kakegawa & Tokiwa Yamasaki & Yuta Miura & Masayuki Itoh & Yukiko Michibata & Ryou Kubota & Tomohiro Doura & Eriko Miura & Hiroshi Nonaka & Seiya Mizuno & Satoru Takahashi & Michis, 2022. "Coordination chemogenetics for activation of GPCR-type glutamate receptors in brain tissue," Nature Communications, Nature, vol. 13(1), pages 1-17, December.
    2. Mingyu Li & Xiaobing Lan & Xinchao Shi & Chunhao Zhu & Xun Lu & Jun Pu & Shaoyong Lu & Jian Zhang, 2024. "Delineating the stepwise millisecond allosteric activation mechanism of the class C GPCR dimer mGlu5," Nature Communications, Nature, vol. 15(1), pages 1-14, December.
    3. Michael R. Schamber & Reza Vafabakhsh, 2022. "Mechanism of sensitivity modulation in the calcium-sensing receptor via electrostatic tuning," Nature Communications, Nature, vol. 13(1), pages 1-14, December.

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