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Design of single-layer β-sheets without a hydrophobic core

Author

Listed:
  • Shohei Koide

    (Department of Biochemistry and Biophysics University of Rochester Medical Center)

  • Xiaolin Huang

    (Department of Biochemistry and Biophysics University of Rochester Medical Center)

  • Karl Link

    (Department of Biochemistry and Biophysics University of Rochester Medical Center)

  • Akiko Koide

    (Department of Biochemistry and Biophysics University of Rochester Medical Center)

  • Zimei Bu

    (Yale University)

  • Donald M. Engelman

    (Yale University)

Abstract

The hydrophobic effect is the main thermodynamic driving force in the folding of water-soluble proteins1,2. Exclusion of nonpolar moieties from aqueous solvent results in the formation of a hydrophobic core in a protein, which has been generally considered essential for specifying and stabilizing the folded structures of proteins1,2,3,4,5,6. Outer surface protein A (OspA) from Borrelia burgdorferi contains a three-stranded β-sheet segment which connects two globular domains7. Although this single-layer β-sheet segment is exposed to solvent on both faces and thus does not contain a hydrophobic core, the segment has a high conformational stability8. Here we report the engineering of OspA variants that contain larger single-layer β-sheets (comprising five and seven β-strands) by duplicating a β-hairpin unit within the β-sheet. Nuclear magnetic resonance and small-angle X-ray scattering analyses reveal that these extended single-layer β-sheets are formed as designed, and amide hydrogen–deuterium exchange and chemical denaturation show that they are stable. Thus, interactions within the β-hairpin unit and those between adjacent units, which do not involve the formation of a hydrophobic core, are sufficient to specify and stabilize the single-layer β-sheet structure. Our results provide an expanded view of protein folding, misfolding and design.

Suggested Citation

  • Shohei Koide & Xiaolin Huang & Karl Link & Akiko Koide & Zimei Bu & Donald M. Engelman, 2000. "Design of single-layer β-sheets without a hydrophobic core," Nature, Nature, vol. 403(6768), pages 456-460, January.
  • Handle: RePEc:nat:nature:v:403:y:2000:i:6768:d:10.1038_35000255
    DOI: 10.1038/35000255
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