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Insights into a dual function amide oxidase/macrocyclase from lankacidin biosynthesis

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  • Jonathan Dorival

    (CNRS-Université de Lorraine, Biopôle de l’Université de Lorraine
    Sorbonne Universités, UPMC Univ. Paris 06, CNRS, UMR 8227, Integrative Biology of Marine Models, Station Biologique de Roscoff)

  • Fanny Risser

    (CNRS-Université de Lorraine, Biopôle de l’Université de Lorraine)

  • Christophe Jacob

    (CNRS-Université de Lorraine, Biopôle de l’Université de Lorraine)

  • Sabrina Collin

    (CNRS-Université de Lorraine, Biopôle de l’Université de Lorraine)

  • Gerald Dräger

    (Leibniz Universität Hannover)

  • Cédric Paris

    (Université de Lorraine)

  • Benjamin Chagot

    (CNRS-Université de Lorraine, Biopôle de l’Université de Lorraine)

  • Andreas Kirschning

    (Leibniz Universität Hannover)

  • Arnaud Gruez

    (CNRS-Université de Lorraine, Biopôle de l’Université de Lorraine)

  • Kira J. Weissman

    (CNRS-Université de Lorraine, Biopôle de l’Université de Lorraine)

Abstract

Acquisition of new catalytic activity is a relatively rare evolutionary event. A striking example appears in the pathway to the antibiotic lankacidin, as a monoamine oxidase (MAO) family member, LkcE, catalyzes both an unusual amide oxidation, and a subsequent intramolecular Mannich reaction to form the polyketide macrocycle. We report evidence here for the molecular basis for this dual activity. The reaction sequence involves several essential active site residues and a conformational change likely comprising an interdomain hinge movement. These features, which have not previously been described in the MAO family, both depend on a unique dimerization mode relative to all structurally characterized members. Taken together, these data add weight to the idea that designing new multifunctional enzymes may require changes in both architecture and catalytic machinery. Encouragingly, however, our data also show LkcE to bind alternative substrates, supporting its potential utility as a general cyclization catalyst in synthetic biology.

Suggested Citation

  • Jonathan Dorival & Fanny Risser & Christophe Jacob & Sabrina Collin & Gerald Dräger & Cédric Paris & Benjamin Chagot & Andreas Kirschning & Arnaud Gruez & Kira J. Weissman, 2018. "Insights into a dual function amide oxidase/macrocyclase from lankacidin biosynthesis," Nature Communications, Nature, vol. 9(1), pages 1-12, December.
  • Handle: RePEc:nat:natcom:v:9:y:2018:i:1:d:10.1038_s41467-018-06323-w
    DOI: 10.1038/s41467-018-06323-w
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    Cited by:

    1. Hong Jie Zhu & Bo Zhang & Wanqing Wei & Shuang He Liu & Lang Xiang & Jiapeng Zhu & Rui Hua Jiao & Yasuhiro Igarashi & Ghader Bashiri & Yong Liang & Ren Xiang Tan & Hui Ming Ge, 2022. "AvmM catalyses macrocyclization through dehydration/Michael-type addition in alchivemycin A biosynthesis," Nature Communications, Nature, vol. 13(1), pages 1-11, December.
    2. Yuchun Zhao & Xiangyang Liu & Zhihong Xiao & Jie Zhou & Xingyu Song & Xiaozheng Wang & Lijun Hu & Ying Wang & Peng Sun & Wenning Wang & Xinyi He & Shuangjun Lin & Zixin Deng & Lifeng Pan & Ming Jiang, 2023. "O-methyltransferase-like enzyme catalyzed diazo installation in polyketide biosynthesis," Nature Communications, Nature, vol. 14(1), pages 1-14, December.

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