IDEAS home Printed from https://ideas.repec.org/a/nat/natcom/v9y2018i1d10.1038_s41467-018-03748-1.html
   My bibliography  Save this article

Srf destabilizes cellular identity by suppressing cell-type-specific gene expression programs

Author

Listed:
  • Takashi Ikeda

    (Kyoto University)

  • Takafusa Hikichi

    (Kyoto University)

  • Hisashi Miura

    (RIKEN Center for Developmental Biology (CDB))

  • Hirofumi Shibata

    (Kyoto University)

  • Kanae Mitsunaga

    (Kyoto University)

  • Yosuke Yamada

    (Kyoto University
    Kyoto University Hospital)

  • Knut Woltjen

    (Kyoto University
    Kyoto University, Yoshida-honmachi)

  • Kei Miyamoto

    (Kindai University)

  • Ichiro Hiratani

    (RIKEN Center for Developmental Biology (CDB))

  • Yasuhiro Yamada

    (Kyoto University
    The Institute of Medical Science, The University of Tokyo
    Kyoto University)

  • Akitsu Hotta

    (Kyoto University
    Kyoto University)

  • Takuya Yamamoto

    (Kyoto University
    Kyoto University
    AMED-CREST, AMED 1-7-1 Otemachi)

  • Keisuke Okita

    (Kyoto University)

  • Shinji Masui

    (Kyoto University
    JST (Japan Science and Technology Agency))

Abstract

Multicellular organisms consist of multiple cell types. The identity of these cells is primarily maintained by cell-type-specific gene expression programs; however, mechanisms that suppress these programs are poorly defined. Here we show that serum response factor (Srf), a transcription factor that is activated by various extracellular stimuli, can repress cell-type-specific genes and promote cellular reprogramming to pluripotency. Manipulations that decrease β-actin monomer quantity result in the nuclear accumulation of Mkl1 and the activation of Srf, which downregulate cell-type-specific genes and alter the epigenetics of regulatory regions and chromatin organization. Mice overexpressing Srf exhibit various pathologies including an ulcerative colitis-like symptom and a metaplasia-like phenotype in the pancreas. Our results demonstrate an unexpected function of Srf via a mechanism by which extracellular stimuli actively destabilize cell identity and suggest Srf involvement in a wide range of diseases.

Suggested Citation

  • Takashi Ikeda & Takafusa Hikichi & Hisashi Miura & Hirofumi Shibata & Kanae Mitsunaga & Yosuke Yamada & Knut Woltjen & Kei Miyamoto & Ichiro Hiratani & Yasuhiro Yamada & Akitsu Hotta & Takuya Yamamoto, 2018. "Srf destabilizes cellular identity by suppressing cell-type-specific gene expression programs," Nature Communications, Nature, vol. 9(1), pages 1-15, December.
  • Handle: RePEc:nat:natcom:v:9:y:2018:i:1:d:10.1038_s41467-018-03748-1
    DOI: 10.1038/s41467-018-03748-1
    as

    Download full text from publisher

    File URL: https://www.nature.com/articles/s41467-018-03748-1
    File Function: Abstract
    Download Restriction: no

    File URL: https://libkey.io/10.1038/s41467-018-03748-1?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:9:y:2018:i:1:d:10.1038_s41467-018-03748-1. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    We have no bibliographic references for this item. You can help adding them by using this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.