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Multi-wavelength anomalous diffraction de novo phasing using a two-colour X-ray free-electron laser with wide tunability

Author

Listed:
  • Alexander Gorel

    (Max-Planck-Institut für medizinische Forschung)

  • Koji Motomura

    (Tohoku University
    RIKEN SPring-8 Center)

  • Hironobu Fukuzawa

    (Tohoku University
    RIKEN SPring-8 Center)

  • R. Bruce Doak

    (Max-Planck-Institut für medizinische Forschung)

  • Marie Luise Grünbein

    (Max-Planck-Institut für medizinische Forschung)

  • Mario Hilpert

    (Max-Planck-Institut für medizinische Forschung)

  • Ichiro Inoue

    (RIKEN SPring-8 Center)

  • Marco Kloos

    (Max-Planck-Institut für medizinische Forschung)

  • Gabriela Kovácsová

    (Max-Planck-Institut für medizinische Forschung)

  • Eriko Nango

    (RIKEN SPring-8 Center
    Kyoto University)

  • Karol Nass

    (Max-Planck-Institut für medizinische Forschung)

  • Christopher M. Roome

    (Max-Planck-Institut für medizinische Forschung)

  • Robert L. Shoeman

    (Max-Planck-Institut für medizinische Forschung)

  • Rie Tanaka

    (RIKEN SPring-8 Center)

  • Kensuke Tono

    (Japan Synchrotron Radiation Research Institute)

  • Yasumasa Joti

    (Japan Synchrotron Radiation Research Institute)

  • Makina Yabashi

    (RIKEN SPring-8 Center)

  • So Iwata

    (RIKEN SPring-8 Center
    Kyoto University)

  • Lutz Foucar

    (Max-Planck-Institut für medizinische Forschung)

  • Kiyoshi Ueda

    (Tohoku University
    RIKEN SPring-8 Center)

  • Thomas R. M. Barends

    (Max-Planck-Institut für medizinische Forschung)

  • Ilme Schlichting

    (Max-Planck-Institut für medizinische Forschung)

Abstract

Serial femtosecond crystallography at X-ray free-electron lasers (XFELs) offers unprecedented possibilities for macromolecular structure determination of systems prone to radiation damage. However, de novo structure determination, i.e., without prior structural knowledge, is complicated by the inherent inaccuracy of serial femtosecond crystallography data. By its very nature, serial femtosecond crystallography data collection entails shot-to-shot fluctuations in X-ray wavelength and intensity as well as variations in crystal size and quality that must be averaged out. Hence, to obtain accurate diffraction intensities for de novo phasing, large numbers of diffraction patterns are required, and, concomitantly large volumes of sample and long X-ray free-electron laser beamtimes. Here we show that serial femtosecond crystallography data collected using simultaneous two-colour X-ray free-electron laser pulses can be used for multiple wavelength anomalous dispersion phasing. The phase angle determination is significantly more accurate than for single-colour phasing. We anticipate that two-colour multiple wavelength anomalous dispersion phasing will enhance structure determination of difficult-to-phase proteins at X-ray free-electron lasers.

Suggested Citation

  • Alexander Gorel & Koji Motomura & Hironobu Fukuzawa & R. Bruce Doak & Marie Luise Grünbein & Mario Hilpert & Ichiro Inoue & Marco Kloos & Gabriela Kovácsová & Eriko Nango & Karol Nass & Christopher M., 2017. "Multi-wavelength anomalous diffraction de novo phasing using a two-colour X-ray free-electron laser with wide tunability," Nature Communications, Nature, vol. 8(1), pages 1-8, December.
  • Handle: RePEc:nat:natcom:v:8:y:2017:i:1:d:10.1038_s41467-017-00754-7
    DOI: 10.1038/s41467-017-00754-7
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