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Conversion of graded phosphorylation into switch-like nuclear translocation via autoregulatory mechanisms in ERK signalling

Author

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  • Yuki Shindo

    (Graduate School of Frontier Biosciences, Osaka University
    Laboratory for Biochemical Simulation, RIKEN Quantitative Biology Center)

  • Kazunari Iwamoto

    (Laboratory for Biochemical Simulation, RIKEN Quantitative Biology Center
    Present address: Laboratory for Integrated Cellular Systems, RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan)

  • Kazunari Mouri

    (Cellular Informatics Laboratory, RIKEN
    Present address: Laboratory for Cell Polarity Regulation, RIKEN Quantitative Biology Center, Suita, Osaka 565-0874, Japan)

  • Kayo Hibino

    (Cellular Informatics Laboratory, RIKEN
    Laboratory for Cell Signaling Dynamics, RIKEN Quantitative Biology Center
    Present address: Biological Macromolecules Laboratory, Structural Biology Center, National Institute of Genetics, Mishima, Shizuoka 411-8540, Japan)

  • Masaru Tomita

    (Institute for Advanced Biosciences, Keio University)

  • Hidetaka Kosako

    (Fujii Memorial Institute of Medical Sciences, Tokushima University)

  • Yasushi Sako

    (Cellular Informatics Laboratory, RIKEN)

  • Koichi Takahashi

    (Laboratory for Biochemical Simulation, RIKEN Quantitative Biology Center
    Institute for Advanced Biosciences, Keio University)

Abstract

The phosphorylation cascade in the extracellular signal-regulated kinase (ERK) pathway is a versatile reaction network motif that can potentially act as a switch, oscillator or memory. Nevertheless, there is accumulating evidence that the phosphorylation response is mostly linear to extracellular signals in mammalian cells. Here we find that subsequent nuclear translocation gives rise to a switch-like increase in nuclear ERK concentration in response to signal input. The switch-like response disappears in the presence of ERK inhibitor, suggesting the existence of autoregulatory mechanisms for ERK nuclear translocation involved in conversion from a graded to a switch-like response. In vitro reconstruction of ERK nuclear translocation indicates that ERK-mediated phosphorylation of nucleoporins regulates ERK translocation. A mathematical model and knockdown experiments suggest a contribution of nucleoporins to regulation of the ERK nuclear translocation response. Taken together, this study provides evidence that nuclear translocation with autoregulatory mechanisms acts as a switch in ERK signalling.

Suggested Citation

  • Yuki Shindo & Kazunari Iwamoto & Kazunari Mouri & Kayo Hibino & Masaru Tomita & Hidetaka Kosako & Yasushi Sako & Koichi Takahashi, 2016. "Conversion of graded phosphorylation into switch-like nuclear translocation via autoregulatory mechanisms in ERK signalling," Nature Communications, Nature, vol. 7(1), pages 1-10, April.
  • Handle: RePEc:nat:natcom:v:7:y:2016:i:1:d:10.1038_ncomms10485
    DOI: 10.1038/ncomms10485
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    Cited by:

    1. Kazunari Iwamoto & Yuki Shindo & Koichi Takahashi, 2016. "Modeling Cellular Noise Underlying Heterogeneous Cell Responses in the Epidermal Growth Factor Signaling Pathway," PLOS Computational Biology, Public Library of Science, vol. 12(11), pages 1-18, November.

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