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Genome sequence of mungbean and insights into evolution within Vigna species

Author

Listed:
  • Yang Jae Kang

    (Seoul National University)

  • Sue K. Kim

    (Seoul National University)

  • Moon Young Kim

    (Seoul National University)

  • Puji Lestari

    (Seoul National University
    Indonesian Center for Agricultural Biotechnology and Genetic Resources Research and Development)

  • Kil Hyun Kim

    (National Institute of Crop Science, Rural Development Administration)

  • Bo-Keun Ha

    (College of Agriculture and Life Science, Chonnam National University)

  • Tae Hwan Jun

    (College of Natural Resources & Life Science, Pusan National University)

  • Won Joo Hwang

    (Seoul National University)

  • Taeyoung Lee

    (Seoul National University)

  • Jayern Lee

    (Seoul National University)

  • Sangrea Shim

    (Seoul National University)

  • Min Young Yoon

    (Seoul National University)

  • Young Eun Jang

    (Seoul National University)

  • Kwang Soo Han

    (Seoul National University)

  • Puntaree Taeprayoon

    (Faculty of Agriculture at Kamphaeng Saen, Kasetsart University, Kamphaeng Saen Campus, Nakhon Pathom 73140, Thailand)

  • Na Yoon

    (Seoul National University)

  • Prakit Somta

    (Faculty of Agriculture at Kamphaeng Saen, Kasetsart University, Kamphaeng Saen Campus, Nakhon Pathom 73140, Thailand)

  • Patcharin Tanya

    (Faculty of Agriculture at Kamphaeng Saen, Kasetsart University, Kamphaeng Saen Campus, Nakhon Pathom 73140, Thailand)

  • Kwang Soo Kim

    (Seoul National University)

  • Jae-Gyun Gwag

    (National Agrobiodiversity Center, National Academy of Agricultural Science, RDA, 88-20, Seodun-Dong)

  • Jung-Kyung Moon

    (National Institute of Crop Science, Rural Development Administration)

  • Yeong-Ho Lee

    (Seoul National University)

  • Beom-Seok Park

    (The Agricultural Genome Center, National Academy of Agricultural Science, Rural Development Administration)

  • Aureliano Bombarely

    (L.H. Bailey Hortorium, Cornell University)

  • Jeffrey J. Doyle

    (L.H. Bailey Hortorium, Cornell University)

  • Scott A. Jackson

    (Center for Applied Genetic Technologies, University of Georgia)

  • Roland Schafleitner

    (Biotechnology/Molecular Breeding, AVRDC-The World Vegetable Center)

  • Peerasak Srinives

    (Faculty of Agriculture at Kamphaeng Saen, Kasetsart University, Kamphaeng Saen Campus, Nakhon Pathom 73140, Thailand)

  • Rajeev K. Varshney

    (Centre of Excellence in Genomics, International Crops Research Institute for the Semi-Arid Tropics (ICRISAT))

  • Suk-Ha Lee

    (Seoul National University
    Plant Genomics and Breeding Institute, Seoul National University)

Abstract

Mungbean (Vigna radiata) is a fast-growing, warm-season legume crop that is primarily cultivated in developing countries of Asia. Here we construct a draft genome sequence of mungbean to facilitate genome research into the subgenus Ceratotropis, which includes several important dietary legumes in Asia, and to enable a better understanding of the evolution of leguminous species. Based on the de novo assembly of additional wild mungbean species, the divergence of what was eventually domesticated and the sampled wild mungbean species appears to have predated domestication. Moreover, the de novo assembly of a tetraploid Vigna species (V. reflexo-pilosa var. glabra) provides genomic evidence of a recent allopolyploid event. The species tree is constructed using de novo RNA-seq assemblies of 22 accessions of 18 Vigna species and protein sets of Glycine max. The present assembly of V. radiata var. radiata will facilitate genome research and accelerate molecular breeding of the subgenus Ceratotropis.

Suggested Citation

  • Yang Jae Kang & Sue K. Kim & Moon Young Kim & Puji Lestari & Kil Hyun Kim & Bo-Keun Ha & Tae Hwan Jun & Won Joo Hwang & Taeyoung Lee & Jayern Lee & Sangrea Shim & Min Young Yoon & Young Eun Jang & Kwa, 2014. "Genome sequence of mungbean and insights into evolution within Vigna species," Nature Communications, Nature, vol. 5(1), pages 1-9, December.
    • Handle: RePEc:nat:natcom:v:5:y:2014:i:1:d:10.1038_ncomms6443
    DOI: 10.1038/ncomms6443
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    Cited by:

    1. Jiantao Guan & Jintao Zhang & Dan Gong & Zhengquan Zhang & Yang Yu & Gaoling Luo & Prakit Somta & Zheng Hu & Suhua Wang & Xingxing Yuan & Yaowen Zhang & Yanlan Wang & Yanhua Chen & Kularb Laosatit & X, 2022. "Genomic analyses of rice bean landraces reveal adaptation and yield related loci to accelerate breeding," Nature Communications, Nature, vol. 13(1), pages 1-16, December.

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