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The evolution and pathogenic mechanisms of the rice sheath blight pathogen

Author

Listed:
  • Aiping Zheng

    (State Key Laboratory of Hybrid Rice, Sichuan Agricultural University
    Rice Research Institute of Sichuan Agricultural University
    Key Laboratory of Southwest Crop Gene Resource and Genetic Improvement of Ministry of Education, Sichuan Agricultural University)

  • Runmao Lin

    (State Key Laboratory of Hybrid Rice, Sichuan Agricultural University)

  • Danhua Zhang

    (State Key Laboratory of Hybrid Rice, Sichuan Agricultural University)

  • Peigang Qin

    (State Key Laboratory of Hybrid Rice, Sichuan Agricultural University)

  • Lizhi Xu

    (State Key Laboratory of Hybrid Rice, Sichuan Agricultural University)

  • Peng Ai

    (State Key Laboratory of Hybrid Rice, Sichuan Agricultural University)

  • Lei Ding

    (Key Laboratory of Southwest Crop Gene Resource and Genetic Improvement of Ministry of Education, Sichuan Agricultural University)

  • Yanran Wang

    (State Key Laboratory of Hybrid Rice, Sichuan Agricultural University)

  • Yao Chen

    (State Key Laboratory of Hybrid Rice, Sichuan Agricultural University)

  • Yao Liu

    (State Key Laboratory of Hybrid Rice, Sichuan Agricultural University)

  • Zhigang Sun

    (State Key Laboratory of Hybrid Rice, Sichuan Agricultural University)

  • Haitao Feng

    (State Key Laboratory of Hybrid Rice, Sichuan Agricultural University)

  • Xiaoxing Liang

    (State Key Laboratory of Hybrid Rice, Sichuan Agricultural University)

  • Rongtao Fu

    (State Key Laboratory of Hybrid Rice, Sichuan Agricultural University)

  • Changqing Tang

    (State Key Laboratory of Hybrid Rice, Sichuan Agricultural University)

  • Qiao Li

    (State Key Laboratory of Hybrid Rice, Sichuan Agricultural University)

  • Jing Zhang

    (State Key Laboratory of Hybrid Rice, Sichuan Agricultural University)

  • Zelin Xie

    (Key Laboratory of Southwest Crop Gene Resource and Genetic Improvement of Ministry of Education, Sichuan Agricultural University)

  • Qiming Deng

    (State Key Laboratory of Hybrid Rice, Sichuan Agricultural University
    Rice Research Institute of Sichuan Agricultural University
    Key Laboratory of Southwest Crop Gene Resource and Genetic Improvement of Ministry of Education, Sichuan Agricultural University)

  • Shuangcheng Li

    (State Key Laboratory of Hybrid Rice, Sichuan Agricultural University
    Rice Research Institute of Sichuan Agricultural University
    Key Laboratory of Southwest Crop Gene Resource and Genetic Improvement of Ministry of Education, Sichuan Agricultural University)

  • Shiquan Wang

    (State Key Laboratory of Hybrid Rice, Sichuan Agricultural University
    Rice Research Institute of Sichuan Agricultural University
    Key Laboratory of Southwest Crop Gene Resource and Genetic Improvement of Ministry of Education, Sichuan Agricultural University)

  • Jun Zhu

    (State Key Laboratory of Hybrid Rice, Sichuan Agricultural University
    Rice Research Institute of Sichuan Agricultural University
    Key Laboratory of Southwest Crop Gene Resource and Genetic Improvement of Ministry of Education, Sichuan Agricultural University)

  • Lingxia Wang

    (Rice Research Institute of Sichuan Agricultural University)

  • Huainian Liu

    (Rice Research Institute of Sichuan Agricultural University)

  • Ping Li

    (State Key Laboratory of Hybrid Rice, Sichuan Agricultural University
    Rice Research Institute of Sichuan Agricultural University
    Key Laboratory of Southwest Crop Gene Resource and Genetic Improvement of Ministry of Education, Sichuan Agricultural University)

Abstract

Rhizoctonia solani is a major fungal pathogen of rice (Oryza sativa L.) that causes great yield losses in all rice-growing regions of the world. Here we report the draft genome sequence of the rice sheath blight disease pathogen, R. solani AG1 IA, assembled using next-generation Illumina Genome Analyser sequencing technologies. The genome encodes a large and diverse set of secreted proteins, enzymes of primary and secondary metabolism, carbohydrate-active enzymes, and transporters, which probably reflect an exclusive necrotrophic lifestyle. We find few repetitive elements, a closer relationship to Agaricomycotina among Basidiomycetes, and expand protein domains and families. Among the 25 candidate pathogen effectors identified according to their functionality and evolution, we validate 3 that trigger crop defence responses; hence we reveal the exclusive expression patterns of the pathogenic determinants during host infection.

Suggested Citation

  • Aiping Zheng & Runmao Lin & Danhua Zhang & Peigang Qin & Lizhi Xu & Peng Ai & Lei Ding & Yanran Wang & Yao Chen & Yao Liu & Zhigang Sun & Haitao Feng & Xiaoxing Liang & Rongtao Fu & Changqing Tang & Q, 2013. "The evolution and pathogenic mechanisms of the rice sheath blight pathogen," Nature Communications, Nature, vol. 4(1), pages 1-10, June.
    • Handle: RePEc:nat:natcom:v:4:y:2013:i:1:d:10.1038_ncomms2427
    DOI: 10.1038/ncomms2427
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    Cited by:

    1. Wenjin Hu & Xinli Pan & Hafiz Muhammad Khalid Abbas & Fengfeng Li & Wubei Dong, 2017. "Metabolites contributing to Rhizoctonia solani AG-1-IA maturation and sclerotial differentiation revealed by UPLC-QTOF-MS metabolomics," PLOS ONE, Public Library of Science, vol. 12(5), pages 1-16, May.

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