Author
Listed:
- Cheng-Yi Li
(National Yang Ming Chiao Tung University
Taipei Veterans General Hospital
National Yang Ming Chiao Tung University)
- Kao-Jung Chang
(Taipei Veterans General Hospital
National Yang Ming Chiao Tung University
National Yang Ming Chiao Tung University
Taipei Veterans General Hospital)
- Cheng-Fu Yang
(University of California)
- Hsin-Yu Wu
(National Yang Ming Chiao Tung University
Taipei Veterans General Hospital)
- Wenting Chen
(City University of Hong Kong)
- Hritik Bansal
(University of California)
- Ling Chen
(National Yang Ming Chiao Tung University)
- Yi-Ping Yang
(National Yang Ming Chiao Tung University
Taipei Veterans General Hospital)
- Yu-Chun Chen
(National Yang Ming Chiao Tung University
Taipei Veterans General Hospital
Taipei Veterans General Hospital)
- Shih-Pin Chen
(National Yang Ming Chiao Tung University
Taipei Veterans General Hospital
National Yang Ming Chiao Tung University
Taipei Veterans General Hospital)
- Shih-Jen Chen
(National Yang Ming Chiao Tung University
Taipei Veterans General Hospital)
- Jiing-Feng Lirng
(National Yang Ming Chiao Tung University
National Yang Ming Chiao Tung University)
- Kai-Wei Chang
(University of California)
- Shih-Hwa Chiou
(Taipei Veterans General Hospital
National Yang Ming Chiao Tung University
Taipei Veterans General Hospital
National Yang Ming Chiao Tung University)
Abstract
Multi-modal large language models (MLLMs) have transformed the landscape of modern healthcare, with automated radiology report generation (RRG) emerging as a cutting-edge application. While 2D MLLM-based RRG has been well established, its utility for 3D medical images remains largely unexplored. In this regard, we curate the 3D-BrainCT dataset (18,885 text-scan pairs) and develop BrainGPT, a clinically visual instruction-tuned (CVIT) model designed for 3D CT RRG. While we notice that the traditional LLM metrics failed to gauge the diagnostic quality of the RRG, we propose feature-oriented radiology task evaluation (FORTE), an evaluation scheme that captures the clinical essence of the generated reports. Here we show that BrainGPT achieves an average FORTE F1-score of 0.71 (degree = 0.661; landmark = 0.706; feature = 0.693, and impression = 0.779) and 74% of BrainGPT-generated reports were indistinguishable from human-written ground truth in a Turing-like test. Together, our work establishes a comprehensive framework encompassing dataset curation, anatomy-aware model fine-tuning, and the development of robust evaluation metrics for the RRG. By sharing our experience in 3D MLLM-based RRG, we aim to accelerate the expedition in human-machine collaboration for next-generation healthcare.
Suggested Citation
Cheng-Yi Li & Kao-Jung Chang & Cheng-Fu Yang & Hsin-Yu Wu & Wenting Chen & Hritik Bansal & Ling Chen & Yi-Ping Yang & Yu-Chun Chen & Shih-Pin Chen & Shih-Jen Chen & Jiing-Feng Lirng & Kai-Wei Chang & , 2025.
"Towards a holistic framework for multimodal LLM in 3D brain CT radiology report generation,"
Nature Communications, Nature, vol. 16(1), pages 1-14, December.
Handle:
RePEc:nat:natcom:v:16:y:2025:i:1:d:10.1038_s41467-025-57426-0
DOI: 10.1038/s41467-025-57426-0
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