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Deep learning-driven pulmonary artery and vein segmentation reveals demography-associated vasculature anatomical differences

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  • Yuetan Chu

    (King Abdullah University of Science and Technology (KAUST)
    King Abdullah University of Science and Technology (KAUST)
    King Abdullah University of Science and Technology (KAUST))

  • Gongning Luo

    (King Abdullah University of Science and Technology (KAUST)
    King Abdullah University of Science and Technology (KAUST)
    King Abdullah University of Science and Technology (KAUST))

  • Longxi Zhou

    (King Abdullah University of Science and Technology (KAUST)
    King Abdullah University of Science and Technology (KAUST)
    King Abdullah University of Science and Technology (KAUST))

  • Shaodong Cao

    (The Fourth Hospital of Harbin Medical University)

  • Guolin Ma

    (China-Japan Friendship Hospital)

  • Xianglin Meng

    (The First Affiliated Hospital of Harbin Medical University)

  • Juexiao Zhou

    (King Abdullah University of Science and Technology (KAUST)
    King Abdullah University of Science and Technology (KAUST)
    King Abdullah University of Science and Technology (KAUST))

  • Changchun Yang

    (King Abdullah University of Science and Technology (KAUST)
    King Abdullah University of Science and Technology (KAUST)
    King Abdullah University of Science and Technology (KAUST))

  • Dexuan Xie

    (The First Affiliated Hospital of Harbin Medical University)

  • Dan Mu

    (Affiliated Nanjing Drum Tower Hospital of Nanjing University Medical School)

  • Ricardo Henao

    (King Abdullah University of Science and Technology (KAUST))

  • Gianluca Setti

    (King Abdullah University of Science and Technology (KAUST))

  • Xigang Xiao

    (The First Affiliated Hospital of Harbin Medical University)

  • Lianming Wu

    (Shanghai Jiao Tong University)

  • Zhaowen Qiu

    (Northeast Forestry University)

  • Xin Gao

    (King Abdullah University of Science and Technology (KAUST)
    King Abdullah University of Science and Technology (KAUST)
    King Abdullah University of Science and Technology (KAUST))

Abstract

Pulmonary artery-vein segmentation is critical for disease diagnosis and surgical planning. Traditional methods rely on Computed Tomography Pulmonary Angiography (CTPA), which requires contrast agents with potential health risks. Non-contrast CT, a safer and more widely available approach, however, has long been considered impossible for this task. Here we propose High-abundant Pulmonary Artery-vein Segmentation (HiPaS), enabling accurate segmentation across both non-contrast CT and CTPA at multiple resolutions. HiPaS integrates spatial normalization with an iterative segmentation strategy, leveraging lower-level vessel segmentations as priors for higher-level segmentations. Trained on a multi-center dataset comprising 1073 CT volumes with manual annotations, HiPaS achieves superior performance (dice score: 91.8%, sensitivity: 98.0%) and demonstrates non-inferiority on non-contrast CT compared to CTPA. Furthermore, HiPaS enables large-scale analysis of 11,784 participants, revealing associations between vessel abundance and sex, age, and diseases, under lung-volume control. HiPaS represents a promising, non-invasive approach for clinical diagnostics and anatomical research.

Suggested Citation

  • Yuetan Chu & Gongning Luo & Longxi Zhou & Shaodong Cao & Guolin Ma & Xianglin Meng & Juexiao Zhou & Changchun Yang & Dexuan Xie & Dan Mu & Ricardo Henao & Gianluca Setti & Xigang Xiao & Lianming Wu & , 2025. "Deep learning-driven pulmonary artery and vein segmentation reveals demography-associated vasculature anatomical differences," Nature Communications, Nature, vol. 16(1), pages 1-14, December.
  • Handle: RePEc:nat:natcom:v:16:y:2025:i:1:d:10.1038_s41467-025-56505-6
    DOI: 10.1038/s41467-025-56505-6
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