Discovering type I cis-AT polyketides through computational mass spectrometry and genome mining with Seq2PKS
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DOI: 10.1038/s41467-024-49587-1
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- Chad W. Johnston & Michael A. Skinnider & Morgan A. Wyatt & Xiang Li & Michael R. M. Ranieri & Lian Yang & David L. Zechel & Bin Ma & Nathan A. Magarvey, 2015. "An automated Genomes-to-Natural Products platform (GNP) for the discovery of modular natural products," Nature Communications, Nature, vol. 6(1), pages 1-11, December.
- Bahar Behsaz & Edna Bode & Alexey Gurevich & Yan-Ni Shi & Florian Grundmann & Deepa Acharya & Andrés Mauricio Caraballo-Rodríguez & Amina Bouslimani & Morgan Panitchpakdi & Annabell Linck & Changhui G, 2021. "Integrating genomics and metabolomics for scalable non-ribosomal peptide discovery," Nature Communications, Nature, vol. 12(1), pages 1-17, December.
- Yi-Yuan Lee & Mustafa Guler & Desnor N. Chigumba & Shen Wang & Neel Mittal & Cameron Miller & Benjamin Krummenacher & Haodong Liu & Liu Cao & Aditya Kannan & Keshav Narayan & Samuel T. Slocum & Bryan , 2023. "HypoRiPPAtlas as an Atlas of hypothetical natural products for mass spectrometry database search," Nature Communications, Nature, vol. 14(1), pages 1-17, December.
- Hosein Mohimani & Alexey Gurevich & Alexander Shlemov & Alla Mikheenko & Anton Korobeynikov & Liu Cao & Egor Shcherbin & Louis-Felix Nothias & Pieter C. Dorrestein & Pavel A. Pevzner, 2018. "Dereplication of microbial metabolites through database search of mass spectra," Nature Communications, Nature, vol. 9(1), pages 1-12, December.
- Michael A. Skinnider & Chad W. Johnston & Mathusan Gunabalasingam & Nishanth J. Merwin & Agata M. Kieliszek & Robyn J. MacLellan & Haoxin Li & Michael R. M. Ranieri & Andrew L. H. Webster & My P. T. C, 2020. "Comprehensive prediction of secondary metabolite structure and biological activity from microbial genome sequences," Nature Communications, Nature, vol. 11(1), pages 1-9, December.
- Bahar Behsaz & Edna Bode & Alexey Gurevich & Yan-Ni Shi & Florian Grundmann & Deepa Acharya & Andrés Mauricio Caraballo-Rodríguez & Amina Bouslimani & Morgan Panitchpakdi & Annabell Linck & Changhui G, 2021. "Publisher Correction: Integrating genomics and metabolomics for scalable non-ribosomal peptide discovery," Nature Communications, Nature, vol. 12(1), pages 1-1, December.
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