Genome-resolved metatranscriptomics reveals conserved root colonization determinants in a synthetic microbiota
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DOI: 10.1038/s41467-023-43688-z
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- Fantin Mesny & Shingo Miyauchi & Thorsten Thiergart & Brigitte Pickel & Lea Atanasova & Magnus Karlsson & Bruno Hüttel & Kerrie W. Barry & Sajeet Haridas & Cindy Chen & Diane Bauer & William Andreopou, 2021. "Genetic determinants of endophytism in the Arabidopsis root mycobiome," Nature Communications, Nature, vol. 12(1), pages 1-15, December.
- Yang Bai & Daniel B. Müller & Girish Srinivas & Ruben Garrido-Oter & Eva Potthoff & Matthias Rott & Nina Dombrowski & Philipp C. Münch & Stijn Spaepen & Mitja Remus-Emsermann & Bruno Hüttel & Alice C., 2015. "Functional overlap of the Arabidopsis leaf and root microbiota," Nature, Nature, vol. 528(7582), pages 364-369, December.
- Gabriel Castrillo & Paulo José Pereira Lima Teixeira & Sur Herrera Paredes & Theresa F. Law & Laura de Lorenzo & Meghan E. Feltcher & Omri M. Finkel & Natalie W. Breakfield & Piotr Mieczkowski & Corbi, 2017. "Root microbiota drive direct integration of phosphate stress and immunity," Nature, Nature, vol. 543(7646), pages 513-518, March.
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