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A super-enhancer-regulated RNA-binding protein cascade drives pancreatic cancer

Author

Listed:
  • Corina E. Antal

    (Salk Institute for Biological Studies
    University of California San Diego
    University of California San Diego)

  • Tae Gyu Oh

    (Salk Institute for Biological Studies
    University of Oklahoma Health Sciences Center)

  • Stefan Aigner

    (University of California San Diego)

  • En-Ching Luo

    (University of California San Diego)

  • Brian A. Yee

    (University of California San Diego)

  • Tania Campos

    (The Francis Crick Institute)

  • Hervé Tiriac

    (University of California San Diego
    University of California San Diego)

  • Katherine L. Rothamel

    (University of California San Diego)

  • Zhang Cheng

    (University of California San Diego)

  • Henry Jiao

    (University of California San Diego)

  • Allen Wang

    (University of California San Diego)

  • Nasun Hah

    (Salk Institute for Biological Studies)

  • Elizabeth Lenkiewicz

    (Mayo Clinic in Arizona)

  • Jan C. Lumibao

    (Salk Institute for Biological Studies)

  • Morgan L. Truitt

    (Salk Institute for Biological Studies)

  • Gabriela Estepa

    (Salk Institute for Biological Studies)

  • Ester Banayo

    (Salk Institute for Biological Studies)

  • Senada Bashi

    (Salk Institute for Biological Studies)

  • Edgar Esparza

    (University of California San Diego
    University of California San Diego)

  • Ruben M. Munoz

    (Translational Genomics Research Institute)

  • Jolene K. Diedrich

    (Salk Institute for Biological Studies)

  • Nicole M. Sodir

    (The Francis Crick Institute
    Department of Translational Oncology)

  • Jasmine R. Mueller

    (University of California San Diego)

  • Cory R. Fraser

    (HonorHealth Research Institute
    Scottsdale Pathology Associates)

  • Erkut Borazanci

    (Translational Genomics Research Institute
    HonorHealth Research Institute)

  • David Propper

    (Queen Mary University of London, Charterhouse Square)

  • Daniel D. Von Hoff

    (Translational Genomics Research Institute
    HonorHealth Research Institute)

  • Christopher Liddle

    (University of Sydney, Westmead Hospital)

  • Ruth T. Yu

    (Salk Institute for Biological Studies)

  • Annette R. Atkins

    (Salk Institute for Biological Studies)

  • Haiyong Han

    (Translational Genomics Research Institute)

  • Andrew M. Lowy

    (The Francis Crick Institute
    University of California San Diego)

  • Michael T. Barrett

    (Translational Genomics Research Institute)

  • Dannielle D. Engle

    (Salk Institute for Biological Studies)

  • Gerard I. Evan

    (The Francis Crick Institute)

  • Gene W. Yeo

    (University of California San Diego
    University of California San Diego)

  • Michael Downes

    (Salk Institute for Biological Studies)

  • Ronald M. Evans

    (Salk Institute for Biological Studies)

Abstract

Pancreatic ductal adenocarcinoma (PDAC) is a lethal malignancy in need of new therapeutic options. Using unbiased analyses of super-enhancers (SEs) as sentinels of core genes involved in cell-specific function, here we uncover a druggable SE-mediated RNA-binding protein (RBP) cascade that supports PDAC growth through enhanced mRNA translation. This cascade is driven by a SE associated with the RBP heterogeneous nuclear ribonucleoprotein F, which stabilizes protein arginine methyltransferase 1 (PRMT1) to, in turn, control the translational mediator ubiquitin-associated protein 2-like. All three of these genes and the regulatory SE are essential for PDAC growth and coordinately regulated by the Myc oncogene. In line with this, modulation of the RBP network by PRMT1 inhibition reveals a unique vulnerability in Myc-high PDAC patient organoids and markedly reduces tumor growth in male mice. Our study highlights a functional link between epigenetic regulation and mRNA translation and identifies components that comprise unexpected therapeutic targets for PDAC.

Suggested Citation

  • Corina E. Antal & Tae Gyu Oh & Stefan Aigner & En-Ching Luo & Brian A. Yee & Tania Campos & Hervé Tiriac & Katherine L. Rothamel & Zhang Cheng & Henry Jiao & Allen Wang & Nasun Hah & Elizabeth Lenkiew, 2023. "A super-enhancer-regulated RNA-binding protein cascade drives pancreatic cancer," Nature Communications, Nature, vol. 14(1), pages 1-17, December.
  • Handle: RePEc:nat:natcom:v:14:y:2023:i:1:d:10.1038_s41467-023-40798-6
    DOI: 10.1038/s41467-023-40798-6
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