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B cell profiles, antibody repertoire and reactivity reveal dysregulated responses with autoimmune features in melanoma

Author

Listed:
  • Silvia Crescioli

    (King’s College London, Guy’s Hospital)

  • Isabel Correa

    (King’s College London, Guy’s Hospital)

  • Joseph Ng

    (King’s College London
    University College London)

  • Zena N. Willsmore

    (King’s College London, Guy’s Hospital)

  • Roman Laddach

    (King’s College London, Guy’s Hospital
    King’s College London)

  • Alicia Chenoweth

    (King’s College London, Guy’s Hospital
    King’s College London, Guy’s Hospital)

  • Jitesh Chauhan

    (King’s College London, Guy’s Hospital)

  • Ashley Meo

    (Mount Sinai Hospital)

  • Alexander Stewart

    (University of Surrey)

  • Eleni Kalliolia

    (King’s College London, Guy’s Hospital)

  • Elena Alberts

    (King’s College London, Guy’s Hospital)

  • Rebecca Adams

    (King’s College London, Guy’s Hospital)

  • Robert J. Harris

    (King’s College London, Guy’s Hospital)

  • Silvia Mele

    (King’s College London, Guy’s Hospital)

  • Giulia Pellizzari

    (King’s College London, Guy’s Hospital)

  • Anna B. M. Black

    (King’s College London, Guy’s Hospital)

  • Heather J. Bax

    (King’s College London, Guy’s Hospital)

  • Anthony Cheung

    (King’s College London, Guy’s Hospital
    King’s College London, Guy’s Hospital)

  • Mano Nakamura

    (King’s College London, Guy’s Hospital)

  • Ricarda M. Hoffmann

    (King’s College London, Guy’s Hospital)

  • Manuela Terranova-Barberio

    (King’s College London, Guy’s Hospital)

  • Niwa Ali

    (King’s College London
    King’s College London)

  • Ihor Batruch

    (Mount Sinai Hospital)

  • Antoninus Soosaipillai

    (Mount Sinai Hospital)

  • Ioannis Prassas

    (Mount Sinai Hospital)

  • Antigona Ulndreaj

    (Mount Sinai Hospital)

  • Miyo K. Chatanaka

    (Mount Sinai Hospital
    University of Toronto)

  • Rosamund Nuamah

    (Guy’s and St. Thomas’ NHS Foundation Trust)

  • Shichina Kannambath

    (Guy’s and St. Thomas’ NHS Foundation Trust
    Institute of Cancer Research)

  • Pawan Dhami

    (Guy’s and St. Thomas’ NHS Foundation Trust)

  • Jenny L. C. Geh

    (St John’s Institute of Dermatology, Guy’s, King’s, and St. Thomas’ Hospitals NHS Foundation Trust
    Department of Plastic Surgery at Guy’s and St. Thomas’ NHS Foundation Trust)

  • Alastair D. MacKenzie Ross

    (Department of Plastic Surgery at Guy’s and St. Thomas’ NHS Foundation Trust)

  • Ciaran Healy

    (Department of Plastic Surgery at Guy’s and St. Thomas’ NHS Foundation Trust)

  • Anita Grigoriadis

    (King’s College London, Guy’s Hospital)

  • David Kipling

    (University of Surrey)

  • Panagiotis Karagiannis

    (King’s College London, Guy’s Hospital
    Dana-Farber Cancer Institute)

  • Deborah K. Dunn-Walters

    (University of Surrey)

  • Eleftherios P. Diamandis

    (Mount Sinai Hospital
    University of Toronto
    Mount Sinai Hospital
    University Health Network)

  • Sophia Tsoka

    (King’s College London)

  • James Spicer

    (King’s College London, Guy’s Hospital)

  • Katie E. Lacy

    (King’s College London, Guy’s Hospital)

  • Franca Fraternali

    (King’s College London
    University College London)

  • Sophia N. Karagiannis

    (King’s College London, Guy’s Hospital
    King’s College London, Guy’s Hospital)

Abstract

B cells are known to contribute to the anti-tumor immune response, especially in immunogenic tumors such as melanoma, yet humoral immunity has not been characterized in these cancers to detail. Here we show comprehensive phenotyping in samples of circulating and tumor-resident B cells as well as serum antibodies in melanoma patients. Memory B cells are enriched in tumors compared to blood in paired samples and feature distinct antibody repertoires, linked to specific isotypes. Tumor-associated B cells undergo clonal expansion, class switch recombination, somatic hypermutation and receptor revision. Compared with blood, tumor-associated B cells produce antibodies with proportionally higher levels of unproductive sequences and distinct complementarity determining region 3 properties. The observed features are signs of affinity maturation and polyreactivity and suggest an active and aberrant autoimmune-like reaction in the tumor microenvironment. Consistent with this, tumor-derived antibodies are polyreactive and characterized by autoantigen recognition. Serum antibodies show reactivity to antigens attributed to autoimmune diseases and cancer, and their levels are higher in patients with active disease compared to post-resection state. Our findings thus reveal B cell lineage dysregulation with distinct antibody repertoire and specificity, alongside clonally-expanded tumor-infiltrating B cells with autoimmune-like features, shaping the humoral immune response in melanoma.

Suggested Citation

  • Silvia Crescioli & Isabel Correa & Joseph Ng & Zena N. Willsmore & Roman Laddach & Alicia Chenoweth & Jitesh Chauhan & Ashley Meo & Alexander Stewart & Eleni Kalliolia & Elena Alberts & Rebecca Adams , 2023. "B cell profiles, antibody repertoire and reactivity reveal dysregulated responses with autoimmune features in melanoma," Nature Communications, Nature, vol. 14(1), pages 1-21, December.
  • Handle: RePEc:nat:natcom:v:14:y:2023:i:1:d:10.1038_s41467-023-39042-y
    DOI: 10.1038/s41467-023-39042-y
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    References listed on IDEAS

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    1. Rita Cabrita & Martin Lauss & Adriana Sanna & Marco Donia & Mathilde Skaarup Larsen & Shamik Mitra & Iva Johansson & Bengt Phung & Katja Harbst & Johan Vallon-Christersson & Alison Schoiack & Kristina, 2020. "Author Correction: Tertiary lymphoid structures improve immunotherapy and survival in melanoma," Nature, Nature, vol. 580(7801), pages 1-1, April.
    2. Rita Cabrita & Martin Lauss & Adriana Sanna & Marco Donia & Mathilde Skaarup Larsen & Shamik Mitra & Iva Johansson & Bengt Phung & Katja Harbst & Johan Vallon-Christersson & Alison Schoiack & Kristina, 2020. "Tertiary lymphoid structures improve immunotherapy and survival in melanoma," Nature, Nature, vol. 577(7791), pages 561-565, January.
    3. Safa Aouinti & Dhafer Malouche & Véronique Giudicelli & Sofia Kossida & Marie-Paule Lefranc, 2015. "IMGT/HighV-QUEST Statistical Significance of IMGT Clonotype (AA) Diversity per Gene for Standardized Comparisons of Next Generation Sequencing Immunoprofiles of Immunoglobulins and T Cell Receptors," PLOS ONE, Public Library of Science, vol. 10(11), pages 1-22, November.
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