Impact of diet and host genetics on the murine intestinal mycobiome
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DOI: 10.1038/s41467-023-36479-z
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- Berk Aykut & Smruti Pushalkar & Ruonan Chen & Qianhao Li & Raquel Abengozar & Jacqueline I. Kim & Sorin A. Shadaloey & Dongling Wu & Pamela Preiss & Narendra Verma & Yuqi Guo & Anjana Saxena & Mridula, 2019. "The fungal mycobiome promotes pancreatic oncogenesis via activation of MBL," Nature, Nature, vol. 574(7777), pages 264-267, October.
- Fen Zhang & Tao Zuo & Yun Kit Yeoh & Frankie W. T. Cheng & Qin Liu & Whitney Tang & Kitty C. Y. Cheung & Keli Yang & Chun Pan Cheung & Chow Chung Mo & Mamie Hui & Francis K. L. Chan & Chi-Kong Li & Pa, 2021. "Longitudinal dynamics of gut bacteriome, mycobiome and virome after fecal microbiota transplantation in graft-versus-host disease," Nature Communications, Nature, vol. 12(1), pages 1-11, December.
- Artem Vorobyev & Yask Gupta & Tanya Sezin & Hiroshi Koga & Yannic C. Bartsch & Meriem Belheouane & Sven Künzel & Christian Sina & Paul Schilf & Heiko Körber-Ahrens & Foteini Beltsiou & Anna Lara Ernst, 2019. "Gene-diet interactions associated with complex trait variation in an advanced intercross outbred mouse line," Nature Communications, Nature, vol. 10(1), pages 1-15, December.
- Ohad Manor & Chengzhen L. Dai & Sergey A. Kornilov & Brett Smith & Nathan D. Price & Jennifer C. Lovejoy & Sean M. Gibbons & Andrew T. Magis, 2020. "Health and disease markers correlate with gut microbiome composition across thousands of people," Nature Communications, Nature, vol. 11(1), pages 1-12, December.
- Paul J McMurdie & Susan Holmes, 2014. "Waste Not, Want Not: Why Rarefying Microbiome Data Is Inadmissible," PLOS Computational Biology, Public Library of Science, vol. 10(4), pages 1-12, April.
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