IDEAS home Printed from https://ideas.repec.org/a/nat/natcom/v12y2021i1d10.1038_s41467-021-24432-x.html
   My bibliography  Save this article

The role of membrane destabilisation and protein dynamics in BAM catalysed OMP folding

Author

Listed:
  • Paul White

    (University of Leeds
    GlaxoSmithKline R&D)

  • Samuel F. Haysom

    (University of Leeds)

  • Matthew G. Iadanza

    (University of Leeds
    Science and Technology Facilities Council)

  • Anna J. Higgins

    (University of Leeds)

  • Jonathan M. Machin

    (University of Leeds)

  • James M. Whitehouse

    (University of Leeds)

  • Jim E. Horne

    (University of Leeds
    University of Oxford)

  • Bob Schiffrin

    (University of Leeds)

  • Charlotte Carpenter-Platt

    (University of Leeds)

  • Antonio N. Calabrese

    (University of Leeds)

  • Kelly M. Storek

    (Genentech Inc.)

  • Steven T. Rutherford

    (Genentech Inc.)

  • David J. Brockwell

    (University of Leeds)

  • Neil A. Ranson

    (University of Leeds)

  • Sheena E. Radford

    (University of Leeds)

Abstract

The folding of β-barrel outer membrane proteins (OMPs) in Gram-negative bacteria is catalysed by the β-barrel assembly machinery (BAM). How lateral opening in the β-barrel of the major subunit BamA assists in OMP folding, and the contribution of membrane disruption to BAM catalysis remain unresolved. Here, we use an anti-BamA monoclonal antibody fragment (Fab1) and two disulphide-crosslinked BAM variants (lid-locked (LL), and POTRA-5-locked (P5L)) to dissect these roles. Despite being lethal in vivo, we show that all complexes catalyse folding in vitro, albeit less efficiently than wild-type BAM. CryoEM reveals that while Fab1 and BAM-P5L trap an open-barrel state, BAM-LL contains a mixture of closed and contorted, partially-open structures. Finally, all three complexes globally destabilise the lipid bilayer, while BamA does not, revealing that the BAM lipoproteins are required for this function. Together the results provide insights into the role of BAM structure and lipid dynamics in OMP folding.

Suggested Citation

  • Paul White & Samuel F. Haysom & Matthew G. Iadanza & Anna J. Higgins & Jonathan M. Machin & James M. Whitehouse & Jim E. Horne & Bob Schiffrin & Charlotte Carpenter-Platt & Antonio N. Calabrese & Kell, 2021. "The role of membrane destabilisation and protein dynamics in BAM catalysed OMP folding," Nature Communications, Nature, vol. 12(1), pages 1-13, December.
  • Handle: RePEc:nat:natcom:v:12:y:2021:i:1:d:10.1038_s41467-021-24432-x
    DOI: 10.1038/s41467-021-24432-x
    as

    Download full text from publisher

    File URL: https://www.nature.com/articles/s41467-021-24432-x
    File Function: Abstract
    Download Restriction: no

    File URL: https://libkey.io/10.1038/s41467-021-24432-x?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Dawei Sun & Kelly M. Storek & Dimitry Tegunov & Ying Yang & Christopher P. Arthur & Matthew Johnson & John G. Quinn & Weijing Liu & Guanghui Han & Hany S. Girgis & Mary Kate Alexander & Austin K. Murc, 2024. "The discovery and structural basis of two distinct state-dependent inhibitors of BamA," Nature Communications, Nature, vol. 15(1), pages 1-15, December.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:12:y:2021:i:1:d:10.1038_s41467-021-24432-x. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    We have no bibliographic references for this item. You can help adding them by using this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.