IDEAS home Printed from https://ideas.repec.org/a/nat/natcom/v12y2021i1d10.1038_s41467-021-24075-y.html
   My bibliography  Save this article

Physical constraints and functional plasticity of cellulases

Author

Listed:
  • Jeppe Kari

    (Technical University of Denmark)

  • Gustavo A. Molina

    (Technical University of Denmark)

  • Kay S. Schaller

    (Technical University of Denmark)

  • Corinna Schiano-di-Cola

    (Technical University of Denmark)

  • Stefan J. Christensen

    (Technical University of Denmark)

  • Silke F. Badino

    (Technical University of Denmark)

  • Trine H. Sørensen

    (Novozymes A/S)

  • Nanna S. Røjel

    (Roskilde University, Universitetsvej 1)

  • Malene B. Keller

    (University of Copenhagen)

  • Nanna Rolsted Sørensen

    (Roskilde University, Universitetsvej 1)

  • Bartlomiej Kolaczkowski

    (Roskilde University, Universitetsvej 1)

  • Johan P. Olsen

    (Novozymes A/S)

  • Kristian B. R. M. Krogh

    (Novozymes A/S)

  • Kenneth Jensen

    (Novozymes A/S)

  • Ana M. Cavaleiro

    (Novozymes A/S)

  • Günther H. J. Peters

    (Technical University of Denmark)

  • Nikolaj Spodsberg

    (Novozymes A/S)

  • Kim Borch

    (Novozymes A/S)

  • Peter Westh

    (Technical University of Denmark)

Abstract

Enzyme reactions, both in Nature and technical applications, commonly occur at the interface of immiscible phases. Nevertheless, stringent descriptions of interfacial enzyme catalysis remain sparse, and this is partly due to a shortage of coherent experimental data to guide and assess such work. In this work, we produced and kinetically characterized 83 cellulases, which revealed a conspicuous linear free energy relationship (LFER) between the substrate binding strength and the activation barrier. The scaling occurred despite the investigated enzymes being structurally and mechanistically diverse. We suggest that the scaling reflects basic physical restrictions of the hydrolytic process and that evolutionary selection has condensed cellulase phenotypes near the line. One consequence of the LFER is that the activity of a cellulase can be estimated from its substrate binding strength, irrespectively of structural and mechanistic details, and this appears promising for in silico selection and design within this industrially important group of enzymes.

Suggested Citation

  • Jeppe Kari & Gustavo A. Molina & Kay S. Schaller & Corinna Schiano-di-Cola & Stefan J. Christensen & Silke F. Badino & Trine H. Sørensen & Nanna S. Røjel & Malene B. Keller & Nanna Rolsted Sørensen & , 2021. "Physical constraints and functional plasticity of cellulases," Nature Communications, Nature, vol. 12(1), pages 1-10, December.
  • Handle: RePEc:nat:natcom:v:12:y:2021:i:1:d:10.1038_s41467-021-24075-y
    DOI: 10.1038/s41467-021-24075-y
    as

    Download full text from publisher

    File URL: https://www.nature.com/articles/s41467-021-24075-y
    File Function: Abstract
    Download Restriction: no

    File URL: https://libkey.io/10.1038/s41467-021-24075-y?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Hideshi Ooka & Yoko Chiba & Ryuhei Nakamura, 2023. "Thermodynamic principle to enhance enzymatic activity using the substrate affinity," Nature Communications, Nature, vol. 14(1), pages 1-9, December.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:12:y:2021:i:1:d:10.1038_s41467-021-24075-y. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    We have no bibliographic references for this item. You can help adding them by using this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.