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Translation error clusters induced by aminoglycoside antibiotics

Author

Listed:
  • Ingo Wohlgemuth

    (Max Planck Institute for Biophysical Chemistry)

  • Raffaella Garofalo

    (Max Planck Institute for Biophysical Chemistry)

  • Ekaterina Samatova

    (Max Planck Institute for Biophysical Chemistry)

  • Aybeg Nafiz Günenç

    (Max Planck Institute for Biophysical Chemistry)

  • Christof Lenz

    (Max Planck Institute for Biophysical Chemistry
    University Medical Center Goettingen)

  • Henning Urlaub

    (Max Planck Institute for Biophysical Chemistry
    University Medical Center Goettingen)

  • Marina V. Rodnina

    (Max Planck Institute for Biophysical Chemistry)

Abstract

Aminoglycoside antibiotics target the ribosome and induce mistranslation, yet which translation errors induce bacterial cell death is unclear. The analysis of cellular proteins by quantitative mass spectrometry shows that bactericidal aminoglycosides induce not only single translation errors, but also clusters of errors in full-length proteins in vivo with as many as four amino acid substitutions in a row. The downstream errors in a cluster are up to 10,000-fold more frequent than the first error and independent of the intracellular aminoglycoside concentration. The prevalence, length, and composition of error clusters depends not only on the misreading propensity of a given aminoglycoside, but also on its ability to inhibit ribosome translocation along the mRNA. Error clusters constitute a distinct class of misreading events in vivo that may provide the predominant source of proteotoxic stress at low aminoglycoside concentration, which is particularly important for the autocatalytic uptake of the drugs.

Suggested Citation

  • Ingo Wohlgemuth & Raffaella Garofalo & Ekaterina Samatova & Aybeg Nafiz Günenç & Christof Lenz & Henning Urlaub & Marina V. Rodnina, 2021. "Translation error clusters induced by aminoglycoside antibiotics," Nature Communications, Nature, vol. 12(1), pages 1-14, December.
  • Handle: RePEc:nat:natcom:v:12:y:2021:i:1:d:10.1038_s41467-021-21942-6
    DOI: 10.1038/s41467-021-21942-6
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    Cited by:

    1. Valentyn Petrychenko & Bee-Zen Peng & Ana C. A. P. Schwarzer & Frank Peske & Marina V. Rodnina & Niels Fischer, 2021. "Structural mechanism of GTPase-powered ribosome-tRNA movement," Nature Communications, Nature, vol. 12(1), pages 1-9, December.
    2. Maria Luisa Romero Romero & Jonas Poehls & Anastasiia Kirilenko & Doris Richter & Tobias Jumel & Anna Shevchenko & Agnes Toth-Petroczy, 2024. "Environment modulates protein heterogeneity through transcriptional and translational stop codon readthrough," Nature Communications, Nature, vol. 15(1), pages 1-18, December.

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