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Single cell transcriptomics of primate sensory neurons identifies cell types associated with chronic pain

Author

Listed:
  • Jussi Kupari

    (Karolinska Institutet)

  • Dmitry Usoskin

    (Karolinska Institutet)

  • Marc Parisien

    (McGill University)

  • Daohua Lou

    (Karolinska Institutet)

  • Yizhou Hu

    (Karolinska Institutet)

  • Michael Fatt

    (Karolinska Institutet)

  • Peter Lönnerberg

    (Karolinska Institutet)

  • Mats Spångberg

    (Karolinska Institutet)

  • Bengt Eriksson

    (Karolinska Institutet)

  • Nikolaos Barkas

    (Harvard Medical School)

  • Peter V. Kharchenko

    (Harvard Medical School)

  • Karin Loré

    (Karolinska Institutet
    Karolinska Institutet)

  • Samar Khoury

    (McGill University)

  • Luda Diatchenko

    (McGill University)

  • Patrik Ernfors

    (Karolinska Institutet)

Abstract

Distinct types of dorsal root ganglion sensory neurons may have unique contributions to chronic pain. Identification of primate sensory neuron types is critical for understanding the cellular origin and heritability of chronic pain. However, molecular insights into the primate sensory neurons are missing. Here we classify non-human primate dorsal root ganglion sensory neurons based on their transcriptome and map human pain heritability to neuronal types. First, we identified cell correlates between two major datasets for mouse sensory neuron types. Machine learning exposes an overall cross-species conservation of somatosensory neurons between primate and mouse, although with differences at individual gene level, highlighting the importance of primate data for clinical translation. We map genomic loci associated with chronic pain in human onto primate sensory neuron types to identify the cellular origin of chronic pain. Genome-wide associations for chronic pain converge on two different neuronal types distributed between pain disorders that display different genetic susceptibilities, suggesting both unique and shared mechanisms between different pain conditions.

Suggested Citation

  • Jussi Kupari & Dmitry Usoskin & Marc Parisien & Daohua Lou & Yizhou Hu & Michael Fatt & Peter Lönnerberg & Mats Spångberg & Bengt Eriksson & Nikolaos Barkas & Peter V. Kharchenko & Karin Loré & Samar , 2021. "Single cell transcriptomics of primate sensory neurons identifies cell types associated with chronic pain," Nature Communications, Nature, vol. 12(1), pages 1-15, December.
  • Handle: RePEc:nat:natcom:v:12:y:2021:i:1:d:10.1038_s41467-021-21725-z
    DOI: 10.1038/s41467-021-21725-z
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    Cited by:

    1. Prach Techameena & Xiaona Feng & Kaiwen Zhang & Saida Hadjab, 2024. "The single-cell transcriptomic atlas iPain identifies senescence of nociceptors as a therapeutical target for chronic pain treatment," Nature Communications, Nature, vol. 15(1), pages 1-15, December.
    2. Timo A. Nees & Na Wang & Pavel Adamek & Nadja Zeitzschel & Clement Verkest & Carmen Porta & Irina Schaefer & Julie Virnich & Selin Balkaya & Vincenzo Prato & Chiara Morelli & Valerie Begay & Young Jae, 2023. "Role of TMEM100 in mechanically insensitive nociceptor un-silencing," Nature Communications, Nature, vol. 14(1), pages 1-17, December.
    3. Min Jung & Michelle Dourado & James Maksymetz & Amanda Jacobson & Benjamin I. Laufer & Miriam Baca & Oded Foreman & David H. Hackos & Lorena Riol-Blanco & Joshua S. Kaminker, 2023. "Cross-species transcriptomic atlas of dorsal root ganglia reveals species-specific programs for sensory function," Nature Communications, Nature, vol. 14(1), pages 1-15, December.

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