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Phase imaging with computational specificity (PICS) for measuring dry mass changes in sub-cellular compartments

Author

Listed:
  • Mikhail E. Kandel

    (University of Illinois at Urbana-Champaign
    University of Illinois at Urbana-Champaign)

  • Yuchen R. He

    (University of Illinois at Urbana-Champaign
    University of Illinois at Urbana-Champaign)

  • Young Jae Lee

    (University of Illinois at Urbana-Champaign
    University of Illinois at Urbana-Champaign)

  • Taylor Hsuan-Yu Chen

    (University of Illinois at Urbana-Champaign
    University of Illinois at Urbana-Champaign)

  • Kathryn Michele Sullivan

    (University of Illinois at Urbana-Champaign)

  • Onur Aydin

    (University of Illinois at Urbana-Champaign)

  • M. Taher A. Saif

    (University of Illinois at Urbana-Champaign
    University of Illinois at Urbana-Champaign)

  • Hyunjoon Kong

    (University of Illinois at Urbana-Champaign
    University of Illinois at Urbana-Champaign
    University of Illinois at Urbana-Champaign
    University of Illinois at Urbana-Champaign)

  • Nahil Sobh

    (University of Illinois at Urbana-Champaign)

  • Gabriel Popescu

    (University of Illinois at Urbana-Champaign
    University of Illinois at Urbana-Champaign
    University of Illinois at Urbana-Champaign)

Abstract

Due to its specificity, fluorescence microscopy has become a quintessential imaging tool in cell biology. However, photobleaching, phototoxicity, and related artifacts continue to limit fluorescence microscopy’s utility. Recently, it has been shown that artificial intelligence (AI) can transform one form of contrast into another. We present phase imaging with computational specificity (PICS), a combination of quantitative phase imaging and AI, which provides information about unlabeled live cells with high specificity. Our imaging system allows for automatic training, while inference is built into the acquisition software and runs in real-time. Applying the computed fluorescence maps back to the quantitative phase imaging (QPI) data, we measured the growth of both nuclei and cytoplasm independently, over many days, without loss of viability. Using a QPI method that suppresses multiple scattering, we measured the dry mass content of individual cell nuclei within spheroids. In its current implementation, PICS offers a versatile quantitative technique for continuous simultaneous monitoring of individual cellular components in biological applications where long-term label-free imaging is desirable.

Suggested Citation

  • Mikhail E. Kandel & Yuchen R. He & Young Jae Lee & Taylor Hsuan-Yu Chen & Kathryn Michele Sullivan & Onur Aydin & M. Taher A. Saif & Hyunjoon Kong & Nahil Sobh & Gabriel Popescu, 2020. "Phase imaging with computational specificity (PICS) for measuring dry mass changes in sub-cellular compartments," Nature Communications, Nature, vol. 11(1), pages 1-10, December.
  • Handle: RePEc:nat:natcom:v:11:y:2020:i:1:d:10.1038_s41467-020-20062-x
    DOI: 10.1038/s41467-020-20062-x
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    Cited by:

    1. Chenfei Hu & Shenghua He & Young Jae Lee & Yuchen He & Edward M. Kong & Hua Li & Mark A. Anastasio & Gabriel Popescu, 2022. "Live-dead assay on unlabeled cells using phase imaging with computational specificity," Nature Communications, Nature, vol. 13(1), pages 1-8, December.

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