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Complex multicomponent patterns rendered on a 3D DNA-barrel pegboard

Author

Listed:
  • Shelley F. J. Wickham

    (Harvard Medical School
    Dana-Farber Cancer Institute
    Wyss Institute for Biologically Inspired Engineering
    The University of Sydney)

  • Alexander Auer

    (Ludwig Maximilian University
    Max Planck Institute of Biochemistry)

  • Jianghong Min

    (Harvard Medical School
    Dana-Farber Cancer Institute
    Wyss Institute for Biologically Inspired Engineering)

  • Nandhini Ponnuswamy

    (Harvard Medical School
    Dana-Farber Cancer Institute
    Wyss Institute for Biologically Inspired Engineering)

  • Johannes B. Woehrstein

    (Ludwig Maximilian University
    Max Planck Institute of Biochemistry)

  • Florian Schueder

    (Ludwig Maximilian University
    Max Planck Institute of Biochemistry)

  • Maximilian T. Strauss

    (Ludwig Maximilian University
    Max Planck Institute of Biochemistry)

  • Jörg Schnitzbauer

    (Ludwig Maximilian University
    Max Planck Institute of Biochemistry)

  • Bhavik Nathwani

    (Harvard Medical School
    Dana-Farber Cancer Institute
    Wyss Institute for Biologically Inspired Engineering)

  • Zhao Zhao

    (Harvard Medical School
    Dana-Farber Cancer Institute
    Wyss Institute for Biologically Inspired Engineering)

  • Steven D. Perrault

    (Harvard Medical School
    Dana-Farber Cancer Institute
    Wyss Institute for Biologically Inspired Engineering)

  • Jaeseung Hahn

    (Harvard Medical School
    Dana-Farber Cancer Institute
    Wyss Institute for Biologically Inspired Engineering)

  • Seungwoo Lee

    (Harvard Medical School
    Dana-Farber Cancer Institute
    Wyss Institute for Biologically Inspired Engineering)

  • Maartje M. Bastings

    (Harvard Medical School
    Dana-Farber Cancer Institute
    Wyss Institute for Biologically Inspired Engineering)

  • Sarah W. Helmig

    (Aarhus University)

  • Anne Louise Kodal

    (Aarhus University)

  • Peng Yin

    (Wyss Institute for Biologically Inspired Engineering
    Harvard University)

  • Ralf Jungmann

    (Ludwig Maximilian University
    Max Planck Institute of Biochemistry)

  • William M. Shih

    (Harvard Medical School
    Dana-Farber Cancer Institute
    Wyss Institute for Biologically Inspired Engineering)

Abstract

DNA origami, in which a long scaffold strand is assembled with a many short staple strands into parallel arrays of double helices, has proven a powerful method for custom nanofabrication. However, currently the design and optimization of custom 3D DNA-origami shapes is a barrier to rapid application to new areas. Here we introduce a modular barrel architecture, and demonstrate hierarchical assembly of a 100 megadalton DNA-origami barrel of ~90 nm diameter and ~250 nm height, that provides a rhombic-lattice canvas of a thousand pixels each, with pitch of ~8 nm, on its inner and outer surfaces. Complex patterns rendered on these surfaces were resolved using up to twelve rounds of Exchange-PAINT super-resolution microscopy. We envision these structures as versatile nanoscale pegboards for applications requiring complex 3D arrangements of matter, which will serve to promote rapid uptake of this technology in diverse fields beyond specialist groups working in DNA nanotechnology.

Suggested Citation

  • Shelley F. J. Wickham & Alexander Auer & Jianghong Min & Nandhini Ponnuswamy & Johannes B. Woehrstein & Florian Schueder & Maximilian T. Strauss & Jörg Schnitzbauer & Bhavik Nathwani & Zhao Zhao & Ste, 2020. "Complex multicomponent patterns rendered on a 3D DNA-barrel pegboard," Nature Communications, Nature, vol. 11(1), pages 1-10, December.
  • Handle: RePEc:nat:natcom:v:11:y:2020:i:1:d:10.1038_s41467-020-18910-x
    DOI: 10.1038/s41467-020-18910-x
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