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Polypeptide formation in clusters of β-alanine amino acids by single ion impact

Author

Listed:
  • Patrick Rousseau

    (Normandie Univ, ENSICAEN, UNICAEN, CEA, CNRS, CIMAP)

  • Dariusz G. Piekarski

    (Universidad Autónoma de Madrid)

  • Michael Capron

    (Normandie Univ, ENSICAEN, UNICAEN, CEA, CNRS, CIMAP)

  • Alicja Domaracka

    (Normandie Univ, ENSICAEN, UNICAEN, CEA, CNRS, CIMAP)

  • Lamri Adoui

    (Normandie Univ, ENSICAEN, UNICAEN, CEA, CNRS, CIMAP)

  • Fernando Martín

    (Universidad Autónoma de Madrid
    Condensed Matter Physics Center (IFIMAC), Universidad Autónoma de Madrid
    Instituto Madrileño de Estudios Avanzados en Nanociencias (IMDEA-Nanociencia), Cantoblanco)

  • Manuel Alcamí

    (Universidad Autónoma de Madrid
    Instituto Madrileño de Estudios Avanzados en Nanociencias (IMDEA-Nanociencia), Cantoblanco
    Institute for Advanced Research in Chemical Sciences (IAdChem), Universidad Autónoma de Madrid)

  • Sergio Díaz-Tendero

    (Universidad Autónoma de Madrid
    Condensed Matter Physics Center (IFIMAC), Universidad Autónoma de Madrid
    Institute for Advanced Research in Chemical Sciences (IAdChem), Universidad Autónoma de Madrid)

  • Bernd A. Huber

    (Normandie Univ, ENSICAEN, UNICAEN, CEA, CNRS, CIMAP)

Abstract

The formation of peptide bonds by energetic processing of amino acids is an important step towards the formation of biologically relevant molecules. As amino acids are present in space, scenarios have been developed to identify the roots of life on Earth, either by processes occurring in outer space or on Earth itself. We study the formation of peptide bonds in single collisions of low-energy He2+ ions (α-particles) with loosely bound clusters of β-alanine molecules at impact energies typical for solar wind. Experimental fragmentation mass spectra produced by collisions are compared with results of molecular dynamics simulations and an exhaustive exploration of potential energy surfaces. We show that peptide bonds are efficiently formed by water molecule emission, leading to the formation of up to tetrapeptide. The present results show that a plausible route to polypeptides formation in space is the collision of energetic ions with small clusters of amino acids.

Suggested Citation

  • Patrick Rousseau & Dariusz G. Piekarski & Michael Capron & Alicja Domaracka & Lamri Adoui & Fernando Martín & Manuel Alcamí & Sergio Díaz-Tendero & Bernd A. Huber, 2020. "Polypeptide formation in clusters of β-alanine amino acids by single ion impact," Nature Communications, Nature, vol. 11(1), pages 1-8, December.
  • Handle: RePEc:nat:natcom:v:11:y:2020:i:1:d:10.1038_s41467-020-17653-z
    DOI: 10.1038/s41467-020-17653-z
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    Cited by:

    1. Debadarshini Mishra & Aaron C. LaForge & Lauren M. Gorman & Sergio Díaz-Tendero & Fernando Martín & Nora Berrah, 2024. "Direct tracking of H2 roaming reaction in real time," Nature Communications, Nature, vol. 15(1), pages 1-8, December.

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