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H3K9me3-mediated epigenetic regulation of senescence in mice predicts outcome of lymphoma patients

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  • Kolja Schleich

    (Charité – University Medical Center, Department of Hematology, Oncology and Tumor Immunology, Virchow Campus, and Molekulares Krebsforschungszentrum)

  • Julia Kase

    (Charité – University Medical Center, Department of Hematology, Oncology and Tumor Immunology, Virchow Campus, and Molekulares Krebsforschungszentrum)

  • Jan R. Dörr

    (Charité – University Medical Center, Department of Hematology, Oncology and Tumor Immunology, Virchow Campus, and Molekulares Krebsforschungszentrum)

  • Saskia Trescher

    (Humboldt-Universität zu Berlin)

  • Animesh Bhattacharya

    (Charité – University Medical Center, Department of Hematology, Oncology and Tumor Immunology, Virchow Campus, and Molekulares Krebsforschungszentrum)

  • Yong Yu

    (Max-Delbrück-Center for Molecular Medicine in the Helmholtz Association)

  • Elizabeth M. Wailes

    (Charité – University Medical Center, Department of Hematology, Oncology and Tumor Immunology, Virchow Campus, and Molekulares Krebsforschungszentrum)

  • Dorothy N. Y. Fan

    (Charité – University Medical Center, Department of Hematology, Oncology and Tumor Immunology, Virchow Campus, and Molekulares Krebsforschungszentrum
    Deutsches Konsortium für Translationale Krebsforschung (German Cancer Consortium), Partner Site Berlin)

  • Philipp Lohneis

    (University Hospital Cologne)

  • Maja Milanovic

    (Charité – University Medical Center, Department of Hematology, Oncology and Tumor Immunology, Virchow Campus, and Molekulares Krebsforschungszentrum)

  • Andrea Lau

    (Charité – University Medical Center, Department of Hematology, Oncology and Tumor Immunology, Virchow Campus, and Molekulares Krebsforschungszentrum)

  • Dido Lenze

    (Charité – University Medical Center)

  • Michael Hummel

    (Deutsches Konsortium für Translationale Krebsforschung (German Cancer Consortium), Partner Site Berlin
    Charité – University Medical Center)

  • Bjoern Chapuy

    (University Medical Center Göttingen, Department of Hematology and Medical Oncology)

  • Ulf Leser

    (Humboldt-Universität zu Berlin)

  • Maurice Reimann

    (Charité – University Medical Center, Department of Hematology, Oncology and Tumor Immunology, Virchow Campus, and Molekulares Krebsforschungszentrum)

  • Soyoung Lee

    (Charité – University Medical Center, Department of Hematology, Oncology and Tumor Immunology, Virchow Campus, and Molekulares Krebsforschungszentrum
    Max-Delbrück-Center for Molecular Medicine in the Helmholtz Association
    Deutsches Konsortium für Translationale Krebsforschung (German Cancer Consortium), Partner Site Berlin)

  • Clemens A. Schmitt

    (Charité – University Medical Center, Department of Hematology, Oncology and Tumor Immunology, Virchow Campus, and Molekulares Krebsforschungszentrum
    Max-Delbrück-Center for Molecular Medicine in the Helmholtz Association
    Deutsches Konsortium für Translationale Krebsforschung (German Cancer Consortium), Partner Site Berlin
    Kepler University Hospital, Department of Hematology and Oncology, Johannes Kepler University)

Abstract

Lesion-based targeting strategies underlie cancer precision medicine. However, biological principles – such as cellular senescence – remain difficult to implement in molecularly informed treatment decisions. Functional analyses in syngeneic mouse models and cross-species validation in patient datasets might uncover clinically relevant genetics of biological response programs. Here, we show that chemotherapy-exposed primary Eµ-myc transgenic lymphomas – with and without defined genetic lesions – recapitulate molecular signatures of patients with diffuse large B-cell lymphoma (DLBCL). Importantly, we interrogate the murine lymphoma capacity to senesce and its epigenetic control via the histone H3 lysine 9 (H3K9)-methyltransferase Suv(ar)39h1 and H3K9me3-active demethylases by loss- and gain-of-function genetics, and an unbiased clinical trial-like approach. A mouse-derived senescence-indicating gene signature, termed “SUVARness”, as well as high-level H3K9me3 lymphoma expression, predict favorable DLBCL patient outcome. Our data support the use of functional genetics in transgenic mouse models to incorporate basic biology knowledge into cancer precision medicine in the clinic.

Suggested Citation

  • Kolja Schleich & Julia Kase & Jan R. Dörr & Saskia Trescher & Animesh Bhattacharya & Yong Yu & Elizabeth M. Wailes & Dorothy N. Y. Fan & Philipp Lohneis & Maja Milanovic & Andrea Lau & Dido Lenze & Mi, 2020. "H3K9me3-mediated epigenetic regulation of senescence in mice predicts outcome of lymphoma patients," Nature Communications, Nature, vol. 11(1), pages 1-14, December.
  • Handle: RePEc:nat:natcom:v:11:y:2020:i:1:d:10.1038_s41467-020-17467-z
    DOI: 10.1038/s41467-020-17467-z
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