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The MiDAC histone deacetylase complex is essential for embryonic development and has a unique multivalent structure

Author

Listed:
  • Robert E. Turnbull

    (University of Leicester
    University of Leicester)

  • Louise Fairall

    (University of Leicester
    University of Leicester)

  • Almutasem Saleh

    (University of Leicester
    University of Leicester
    Institute of Clinical Sciences, Faculty of Medicine, Imperial College, Hammersmith Hospital Campus)

  • Emma Kelsall

    (University of Leicester
    AstraZeneca, Milstein Building, Granta Park)

  • Kyle L. Morris

    (University of Warwick
    MRC London Institute of Medical Sciences, Hammersmith Hospital Campus)

  • T. J. Ragan

    (University of Leicester)

  • Christos G. Savva

    (University of Leicester)

  • Aditya Chandru

    (University of Leicester
    University of Cambridge)

  • Christopher J. Millard

    (University of Leicester
    University of Leicester)

  • Olga V. Makarova

    (University of Leicester)

  • Corinne J. Smith

    (University of Warwick)

  • Alan M. Roseman

    (University of Manchester)

  • Andrew M. Fry

    (University of Leicester)

  • Shaun M. Cowley

    (University of Leicester)

  • John W. R. Schwabe

    (University of Leicester
    University of Leicester)

Abstract

MiDAC is one of seven distinct, large multi-protein complexes that recruit class I histone deacetylases to the genome to regulate gene expression. Despite implications of involvement in cell cycle regulation and in several cancers, surprisingly little is known about the function or structure of MiDAC. Here we show that MiDAC is important for chromosome alignment during mitosis in cancer cell lines. Mice lacking the MiDAC proteins, DNTTIP1 or MIDEAS, die with identical phenotypes during late embryogenesis due to perturbations in gene expression that result in heart malformation and haematopoietic failure. This suggests that MiDAC has an essential and unique function that cannot be compensated by other HDAC complexes. Consistent with this, the cryoEM structure of MiDAC reveals a unique and distinctive mode of assembly. Four copies of HDAC1 are positioned at the periphery with outward-facing active sites suggesting that the complex may target multiple nucleosomes implying a processive deacetylase function.

Suggested Citation

  • Robert E. Turnbull & Louise Fairall & Almutasem Saleh & Emma Kelsall & Kyle L. Morris & T. J. Ragan & Christos G. Savva & Aditya Chandru & Christopher J. Millard & Olga V. Makarova & Corinne J. Smith , 2020. "The MiDAC histone deacetylase complex is essential for embryonic development and has a unique multivalent structure," Nature Communications, Nature, vol. 11(1), pages 1-15, December.
  • Handle: RePEc:nat:natcom:v:11:y:2020:i:1:d:10.1038_s41467-020-17078-8
    DOI: 10.1038/s41467-020-17078-8
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    Cited by:

    1. Mandy S. M. Wan & Reyhan Muhammad & Marios G. Koliopoulos & Theodoros I. Roumeliotis & Jyoti S. Choudhary & Claudio Alfieri, 2023. "Mechanism of assembly, activation and lysine selection by the SIN3B histone deacetylase complex," Nature Communications, Nature, vol. 14(1), pages 1-13, December.
    2. Jonathan W. Markert & Seychelle M. Vos & Lucas Farnung, 2023. "Structure of the complete Saccharomyces cerevisiae Rpd3S-nucleosome complex," Nature Communications, Nature, vol. 14(1), pages 1-11, December.

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