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Variation among 532 genomes unveils the origin and evolutionary history of a global insect herbivore

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  • Minsheng You

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education)

  • Fushi Ke

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education)

  • Shijun You

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education
    Department of Botany, University of British Columbia)

  • Zhangyan Wu

    (BGI Genomics, BGI-Shenzhen)

  • Qingfeng Liu

    (BGI Genomics, BGI-Shenzhen)

  • Weiyi He

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education)

  • Simon W. Baxter

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education
    School of BioSciences, The University of Melbourne)

  • Zhiguang Yuchi

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Tianjin Key Laboratory for Modern Drug Delivery & High-Efficiency, Collaborative Innovation Center of Chemical Science and Engineering, School of Pharmaceutical Science and Technology, Tianjin University)

  • Liette Vasseur

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education
    Department of Biological Sciences, Brock University, 1812 Sir Isaac Brock Way)

  • Geoff M. Gurr

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education
    Graham Centre, Charles Sturt University)

  • Christopher M. Ward

    (School of Biological Sciences, University of Adelaide)

  • Hugo Cerda

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education
    Instituto Superior de Formación Docente Salomé Ureña (ISFODOSU), Recinto Lus Napoleón Núñez Molina, Carretera Duarte, Km 10 1/2, Municipio de Licey Al Medio)

  • Guang Yang

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education)

  • Lu Peng

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education)

  • Yuanchun Jin

    (BGI Genomics, BGI-Shenzhen)

  • Miao Xie

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education)

  • Lijun Cai

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education)

  • Carl J. Douglas

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education
    Department of Botany, University of British Columbia)

  • Murray B. Isman

    (Faculty of Land and Food Systems, University of British Columbia)

  • Mark S. Goettel

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education
    Agriculture and Agri-Food Canada, Lethbridge Research Centre)

  • Qisheng Song

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education
    Division of Plant Sciences, University of Missouri)

  • Qinghai Fan

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education
    Plant Health & Environment Laboratory, Ministry for Primary Industries)

  • Gefu Wang-Pruski

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education
    Department of Plant, Food, and Environmental Sciences, Faculty of Agriculture, Dalhousie University, PO Box 550)

  • David C. Lees

    (Natural History Museum, Cromwell Road, South Kensington)

  • Zhen Yue

    (BGI Genomics, BGI-Shenzhen)

  • Jianlin Bai

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education)

  • Tiansheng Liu

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education)

  • Lianyun Lin

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    School of BioSciences, The University of Melbourne)

  • Yunkai Zheng

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education)

  • Zhaohua Zeng

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Institute of Plant Protection, Fujian Academy of Agricultural Sciences)

  • Sheng Lin

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education)

  • Yue Wang

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education)

  • Qian Zhao

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education)

  • Xiaofeng Xia

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education)

  • Wenbin Chen

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education)

  • Lilin Chen

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education)

  • Mingmin Zou

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education)

  • Jinying Liao

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education)

  • Qiang Gao

    (BGI Genomics, BGI-Shenzhen)

  • Xiaodong Fang

    (BGI Genomics, BGI-Shenzhen)

  • Ye Yin

    (BGI Genomics, BGI-Shenzhen)

  • Huanming Yang

    (BGI Genomics, BGI-Shenzhen
    Institute of Plant Protection, Fujian Academy of Agricultural Sciences
    James D. Watson Institute of Genome Sciences)

  • Jian Wang

    (BGI Genomics, BGI-Shenzhen
    BGI-Shenzhen
    James D. Watson Institute of Genome Sciences)

  • Liwei Han

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education)

  • Yingjun Lin

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education)

  • Yanping Lu

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education)

  • Mousheng Zhuang

    (State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Institute of Applied Ecology, Fujian Agriculture and Forestry University
    Joint International Research Laboratory of Ecological Pest Control, Ministry of Education)

Abstract

The diamondback moth, Plutella xylostella is a cosmopolitan pest that has evolved resistance to all classes of insecticide, and costs the world economy an estimated US $4-5 billion annually. We analyse patterns of variation among 532 P. xylostella genomes, representing a worldwide sample of 114 populations. We find evidence that suggests South America is the geographical area of origin of this species, challenging earlier hypotheses of an Old-World origin. Our analysis indicates that Plutella xylostella has experienced three major expansions across the world, mainly facilitated by European colonization and global trade. We identify genomic signatures of selection in genes related to metabolic and signaling pathways that could be evidence of environmental adaptation. This evolutionary history of P. xylostella provides insights into transoceanic movements that have enabled it to become a worldwide pest.

Suggested Citation

  • Minsheng You & Fushi Ke & Shijun You & Zhangyan Wu & Qingfeng Liu & Weiyi He & Simon W. Baxter & Zhiguang Yuchi & Liette Vasseur & Geoff M. Gurr & Christopher M. Ward & Hugo Cerda & Guang Yang & Lu Pe, 2020. "Variation among 532 genomes unveils the origin and evolutionary history of a global insect herbivore," Nature Communications, Nature, vol. 11(1), pages 1-8, December.
  • Handle: RePEc:nat:natcom:v:11:y:2020:i:1:d:10.1038_s41467-020-16178-9
    DOI: 10.1038/s41467-020-16178-9
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    Cited by:

    1. Yanting Chen & Zhaoxia Liu & Jacques Régnière & Liette Vasseur & Jian Lin & Shiguo Huang & Fushi Ke & Shaoping Chen & Jianyu Li & Jieling Huang & Geoff M. Gurr & Minsheng You & Shijun You, 2021. "Large-scale genome-wide study reveals climate adaptive variability in a cosmopolitan pest," Nature Communications, Nature, vol. 12(1), pages 1-11, December.

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