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A mathematical-descriptor of tumor-mesoscopic-structure from computed-tomography images annotates prognostic- and molecular-phenotypes of epithelial ovarian cancer

Author

Listed:
  • Haonan Lu

    (Imperial College London
    Imperial College London)

  • Mubarik Arshad

    (Imperial College London)

  • Andrew Thornton

    (Imperial College London)

  • Giacomo Avesani

    (Imperial College London)

  • Paula Cunnea

    (Imperial College London)

  • Ed Curry

    (Imperial College London)

  • Fahdi Kanavati

    (Imperial College London)

  • Jack Liang

    (Imperial College London)

  • Katherine Nixon

    (Imperial College London)

  • Sophie T. Williams

    (Imperial College London)

  • Mona Ali Hassan

    (Imperial College London)

  • David D. L. Bowtell

    (Peter MacCallum Cancer Centre
    The University of Melbourne)

  • Hani Gabra

    (Imperial College London
    AstraZeneca)

  • Christina Fotopoulou

    (Imperial College London)

  • Andrea Rockall

    (Imperial College London
    Imperial College Healthcare NHS Trust
    The Royal Marsden NHS Foundation Trust)

  • Eric O. Aboagye

    (Imperial College London)

Abstract

The five-year survival rate of epithelial ovarian cancer (EOC) is approximately 35–40% despite maximal treatment efforts, highlighting a need for stratification biomarkers for personalized treatment. Here we extract 657 quantitative mathematical descriptors from the preoperative CT images of 364 EOC patients at their initial presentation. Using machine learning, we derive a non-invasive summary-statistic of the primary ovarian tumor based on 4 descriptors, which we name “Radiomic Prognostic Vector” (RPV). RPV reliably identifies the 5% of patients with median overall survival less than 2 years, significantly improves established prognostic methods, and is validated in two independent, multi-center cohorts. Furthermore, genetic, transcriptomic and proteomic analysis from two independent datasets elucidate that stromal phenotype and DNA damage response pathways are activated in RPV-stratified tumors. RPV and its associated analysis platform could be exploited to guide personalized therapy of EOC and is potentially transferrable to other cancer types.

Suggested Citation

  • Haonan Lu & Mubarik Arshad & Andrew Thornton & Giacomo Avesani & Paula Cunnea & Ed Curry & Fahdi Kanavati & Jack Liang & Katherine Nixon & Sophie T. Williams & Mona Ali Hassan & David D. L. Bowtell & , 2019. "A mathematical-descriptor of tumor-mesoscopic-structure from computed-tomography images annotates prognostic- and molecular-phenotypes of epithelial ovarian cancer," Nature Communications, Nature, vol. 10(1), pages 1-11, December.
  • Handle: RePEc:nat:natcom:v:10:y:2019:i:1:d:10.1038_s41467-019-08718-9
    DOI: 10.1038/s41467-019-08718-9
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